RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 VCX3AQ9NNX9 186 aa13.41□□□□□ -0.26
C11orf88-201ENST00000332814 OR6C3Q9NZP0 311 aa13.41□□□□□ -0.26
C11orf88-201ENST00000332814 MEIKINA0A087WXM9 373 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 TRAV24A0A0B4J272 114 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 H3BUI4 141 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 PDCD5O14737 125 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 CLPXO76031 633 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 TNFAIP8O95379 198 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 HTR2CP28335 458 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 GLP1RP43220 463 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 GP2P55259 537 aaKnown RBP13.4□□□□□ -0.26
C11orf88-201ENST00000332814 UBA52P62987 128 aaKnown RBP13.4□□□□□ -0.26
C11orf88-201ENST00000332814 PNKDQ8N490 385 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 ZDHHC22Q8N966 263 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 SUMF2Q8NBJ7 301 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 SLC25A28Q96A46 364 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 PPIL3Q9H2H8 161 aaKnown RBP13.4□□□□□ -0.26
C11orf88-201ENST00000332814 BANF2Q9H503 90 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 IFT22Q9H7X7 185 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 TAS2R3Q9NYW6 316 aa13.4□□□□□ -0.26
C11orf88-201ENST00000332814 AK6Q9Y3D8 172 aaKnown RBP13.4□□□□□ -0.26
C11orf88-201ENST00000332814 BTBD17A6NE02 478 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 HOXA3O43365 443 aaPredicted RBP13.39□□□□□ -0.27
C11orf88-201ENST00000332814 MPIG6BO95866 241 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 IGHV1-8P0DP01 117 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 SAA4P35542 130 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 PSMD7P51665 324 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 DLX6P56179 175 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
C11orf88-201ENST00000332814 NEDD8Q15843 81 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 MIDNQ504T8 468 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 C1orf100Q5SVJ3 147 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 TCF23Q7RTU1 214 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 ZNF565Q8N9K5 539 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 FAM216AQ8WUB2 273 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 COQ2Q96H96 371 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 ESM1Q9NQ30 184 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 SESN1Q9Y6P5 492 aa13.39□□□□□ -0.27
C11orf88-201ENST00000332814 TRDV1A0A1B0GX56 115 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A10PA6NDY2 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A18PA6NE21 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A16PA6NEW6 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A20PA6NIJ5 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A8PA6NJQ4 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A7PA6NKC0 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 ZNF729A6NN14 1252 aaPredicted RBP13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A22PA8MWA6 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A12PA8MX19 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A5PA8MXJ8 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A23PA8MXZ1 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 MCRIP1C9JLW8 97 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 ARG1P05089 322 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A15PP0C7V4 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A13PP0C7W8 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A14PP0C7W9 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 FAM90A24PP0C7X0 464 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 GALP22466 123 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
C11orf88-201ENST00000332814 RAB11BQ15907 218 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 OR52W1Q6IF63 320 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 Q6YL49 198 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 C11orf42Q8N5U0 333 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.38□□□□□ -0.27
C11orf88-201ENST00000332814 KCNG3Q8TAE7 436 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 SSMEM1Q8WWF3 244 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 TMEM59Q9BXS4 323 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 DPAGT1Q9H3H5 408 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 KIF25Q9UIL4 384 aa13.38□□□□□ -0.27
C11orf88-201ENST00000332814 TMEM30CPA0ZSE6 113 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 CLDN34H7C241 214 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 SLC17A2O00624 439 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 SLC22A1O15245 554 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 BPNT1O95861 308 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 MELTFP08582 738 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 ARSBP15848 533 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 RSBN1Q5VWQ0 802 aaPredicted RBP13.37□□□□□ -0.27
C11orf88-201ENST00000332814 RAB12Q6IQ22 244 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 TMEM86BQ8N661 226 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 TMEM104Q8NE00 496 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 PLPPR1Q8TBJ4 325 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 CORO2AQ92828 525 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
C11orf88-201ENST00000332814 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 STUB1Q9UNE7 303 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 SSR3Q9UNL2 185 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 POMT1Q9Y6A1 747 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 V9GY05 133 aa13.37□□□□□ -0.27
C11orf88-201ENST00000332814 A0A087WXM4 84 aa13.36□□□□□ -0.27
C11orf88-201ENST00000332814 RNASE1P07998 156 aaKnown RBP13.36□□□□□ -0.27
C11orf88-201ENST00000332814 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
C11orf88-201ENST00000332814 CDK2P24941 298 aa13.36□□□□□ -0.27
C11orf88-201ENST00000332814 P2RY14Q15391 338 aa13.36□□□□□ -0.27
C11orf88-201ENST00000332814 NKAPLQ5M9Q1 402 aa13.36□□□□□ -0.27
C11orf88-201ENST00000332814 C22orf42Q6IC83 251 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms