RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 HEPN1Q6WQI6 88 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ARRDC1Q8N5I2 433 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM229BQ8NBD8 167 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 H1FXQ92522 213 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 GALMQ96C23 342 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CABLES2Q9BTV7 478 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SUCNR1Q9BXA5 334 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 C6orf62Q9GZU0 229 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 FGF23Q9GZV9 251 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 MBNL3Q9NUK0 354 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 COPZ2Q9P299 210 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 EXTL2Q9UBQ6 330 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ANAPC10Q9UM13 185 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ANKHD1Q8IWZ3 2542 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 IGKV1D-17A0A075B6S4 117 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 KBTBD11-OT1A0A1B0GTJ5 212 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 FABP12A6NFH5 140 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SIRPB1O00241 398 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 F2RL2O00254 374 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ANGPTL7O43827 346 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CREBL2O60519 120 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 EGR1P18146 543 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR3A3P47888 321 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 TAS2R20P59543 309 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CDNFQ49AH0 187 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 BEND2Q8NDZ0 799 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR5D18Q8NGL1 313 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR6Q1Q8NGQ2 317 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 NANPQ8TBE9 248 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SETD6Q8TBK2 473 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ZFAND1Q8TCF1 268 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF486Q96H40 463 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 KIRREL1Q96J84 757 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CCL13Q99616 98 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 COMMD3Q9UBI1 195 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CDC42EP3Q9UKI2 254 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 TRAV18A0A075B6X5 111 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 MEIKINA0A087WXM9 373 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 A0A087X0M5 115 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 IGKV1-12A0A0C4DH73 117 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 A0A1B0GX30 115 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 C3orf80F5H4A9 247 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 YPEL1O60688 119 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 RHBDL1O75783 438 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 IGKV1D-12P01611 117 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 IFNA6P05013 189 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SNRPBP14678 240 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 AMY2BP19961 511 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 LGALS4P56470 323 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 UBE2MP61081 183 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 HERV-K104P61576 105 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 LSM3P62310 102 aaKnown RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 DYRK1AQ13627 763 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SPCS2Q15005 226 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 TAF9Q16594 264 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM249Q2WGJ8 235 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CHRFAM7AQ494W8 412 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 NKAPLQ5M9Q1 402 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 FAM27D1Q5T7N8 215 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 GPR157Q5UAW9 335 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 RSBN1Q5VWQ0 802 aaPredicted RBP4.3□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF826PQ6ZT77 177 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 HOGA1Q86XE5 327 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 CCDC71LQ8N9Z2 235 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 C19orf18Q8NEA5 215 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR5H2Q8NGV7 314 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 OR9G1Q8NH87 305 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 NDNFQ8TB73 568 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 UPRTQ96BW1 309 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 YPEL2Q96QA6 119 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 PRRT1Q99946 306 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 SCP2D1Q9UJQ7 156 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 AUP1Q9Y679 476 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 DSCAMO60469 2012 aa4.3□□□□□ -1.72
LRIT3-201ENST00000327908 FOXI3A8MTJ6 420 aaPredicted RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 RAB27BO00194 218 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 NAPSAO96009 420 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 IFNA2P01563 188 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MT-ND4P03905 459 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SFTPBP07988 381 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 BRS3P32247 399 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 EDDM3BP56851 147 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 TAS2R31P59538 309 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 PAX8Q06710 450 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CDK10Q15131 360 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM255AQ5JRV8 349 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 C9orf139Q6ZV77 190 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MRPL41Q8IXM3 137 aaKnown RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CD177Q8N6Q3 437 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MINDY2Q8NBR6 621 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 DEFB108BQ8NET1 73 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 OR8H1Q8NGG4 311 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 OR5R1Q8NH85 324 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SMIM4Q8WVI0 70 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 AKR1E2Q96JD6 320 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms