RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 ZNF788Q6ZQV5 615 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 CALHM1Q8IU99 346 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 MRGPRFQ96AM1 343 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 R3HDM4Q96D70 268 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 VSIG10L2P0DP72 767 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 GNG3P63215 75 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 C6orf15Q6UXA7 325 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-201ENST00000327367 DOLPP1Q86YN1 238 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 RPS4Y2Q8TD47 263 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 RNF133Q8WVZ7 376 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 PPIL1Q9Y3C6 166 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 LNP1A1A4G5 178 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 TSPAN13O95857 204 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 NMBP08949 121 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 TWIST1Q15672 202 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 JMJD6Q6NYC1 403 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-201ENST00000327367 OR4C3Q8NH37 302 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 GCGP01275 180 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 PAFAH1B2P68402 229 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 IGFBP7Q16270 282 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 DNAJB12Q9NXW2 375 aaKnown RBP14.54□□□□□ -0.08
SMAD3-201ENST00000327367 ZGLP1P0C6A0 271 aa14.54□□□□□ -0.08
SMAD3-201ENST00000327367 HIST1H1EP10412 219 aaKnown RBP14.54□□□□□ -0.08
SMAD3-201ENST00000327367 DMKNQ6E0U4 476 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-201ENST00000327367 M0QZ24 198 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 PDCD6O75340 191 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 PNLIPRP2P54317 469 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 RSPO2Q6UXX9 243 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-201ENST00000327367 OR8I2Q8N0Y5 310 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 OR8B12Q8NGG6 310 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 HDHD3Q9BSH5 251 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-201ENST00000327367 CLN8Q9UBY8 286 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 ZNF793Q6ZN11 406 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 HIST1H4GQ99525 98 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 TMEM30AQ9NV96 361 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 NDUFB3O43676 98 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 PRRX1P54821 245 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 ZNF506Q5JVG8 444 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 CACFD1Q9UGQ2 172 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 PCOLCE2Q9UKZ9 415 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 GRIFINA4D1Z8 144 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 DNASE2O00115 360 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-201ENST00000327367 MFAP2P55001 183 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 PPP2CBP62714 309 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 WIPI1Q5MNZ9 446 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-201ENST00000327367 DMRT1Q9Y5R6 373 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 SHROOM3Q8TF72 1996 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 TRDCB7Z8K6 153 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 H0YL77 283 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 ZNF770Q6IQ21 691 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-201ENST00000327367 OIT3Q8WWZ8 545 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 UQCR10Q9UDW1 63 aa14.53□□□□□ -0.08
SMAD3-201ENST00000327367 URB1O60287 2271 aaKnown RBP14.52□□□□□ -0.08
SMAD3-201ENST00000327367 ST8SIA5O15466 376 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 NUDT3O95989 172 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 CTLA4P16410 223 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 MDH2P40926 338 aaKnown RBP14.52□□□□□ -0.08
SMAD3-201ENST00000327367 LRRC10Q5BKY1 277 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 ANXA10Q9UJ72 324 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 ZNF324O75467 553 aaPredicted RBP14.52□□□□□ -0.08
SMAD3-201ENST00000327367 REC114Q7Z4M0 266 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 OR2V1Q8NHB1 315 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 BEX4Q9NWD9 120 aaPredicted RBP14.52□□□□□ -0.08
SMAD3-201ENST00000327367 FER1L4A9Z1Z3 1794 aa14.52□□□□□ -0.08
SMAD3-201ENST00000327367 CYB5R3P00387 301 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-201ENST00000327367 TMEM50BP56557 158 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 KLK13Q9UKR3 277 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 PRSS23O95084 383 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 PSG2P11465 335 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 ZNF32P17041 273 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 ACP1P24666 158 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 MGAT2Q10469 447 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 C16orf47Q6ZP98 133 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-201ENST00000327367 TMEM208Q9BTX3 173 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 HOXA6P31267 233 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 KIAA1644Q3SXP7 199 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 OR4D11Q8NGI4 311 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 OR4X1Q8NH49 305 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 TLNRD1Q9H1K6 362 aa14.52□□□□□ -0.09
SMAD3-201ENST00000327367 FAHD2BQ6P2I3 314 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-201ENST00000327367 PTX4Q96A99 478 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 GLRX2Q9NS18 164 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 TRAV8-7A0A075B6U6 113 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 NDUFB4O95168 129 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 MYOGP15173 224 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 PRSS41Q7RTY9 318 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 GNRHR2Q96P88 292 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 UBTD1Q9HAC8 227 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 PIGYQ3MUY2 71 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 PARM1Q6UWI2 310 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 RPEQ96AT9 228 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 MRPL18Q9H0U6 180 aaKnown RBP14.51□□□□□ -0.09
SMAD3-201ENST00000327367 IFT172Q9UG01 1749 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 C10orf113Q5VZT2 155 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 RTL10Q7L3V2 364 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 HES7Q9BYE0 225 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 KCNK7Q9Y2U2 307 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 H0YIG0 161 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 IL2RAP01589 272 aa14.51□□□□□ -0.09
SMAD3-201ENST00000327367 HIST1H1BP16401 226 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms