RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 KCNJ3P48549 501 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 MLLT11Q13015 90 aaPredicted RBP11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TPBGQ13641 420 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TRAM1Q15629 374 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TAF9Q16594 264 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 MPV17LQ2QL34 196 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 HSD17B12Q53GQ0 312 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 UNQ9370/PRO34162Q6UXP9 181 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 GDPGP1Q6ZNW5 385 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 CEACAM19Q7Z692 300 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 OR11H6Q8NGC7 330 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 CORO2AQ92828 525 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TMEM203Q969S6 136 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 UQCC2Q9BRT2 126 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 DPCDQ9BVM2 203 aaPredicted RBP11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 VPREB3Q9UKI3 123 aa11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 TBL2Q9Y4P3 447 aaKnown RBP11.92□□□□□ -0.5
TUBA3D-201ENST00000321253 MEIKINA0A087WXM9 373 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 OMGP23515 440 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 PSMA1P25786 263 aaKnown RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 CFPP27918 469 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 MAP2K4P45985 399 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 TBCEQ15813 527 aaPredicted RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 FAM27D1Q5T7N8 215 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 PRAMEF5Q5TYX0 476 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ZNF626Q68DY1 528 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 OR52W1Q6IF63 320 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ZNF565Q8N9K5 539 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 OR4D6Q8NGJ1 314 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 PHYHIPQ92561 330 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 FOXRED1Q96CU9 486 aaPredicted RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 MGLLQ99685 303 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 SSX3Q99909 188 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 SLITRK2Q9H156 845 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 MEGF9Q9H1U4 602 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 PPIL3Q9H2H8 161 aaKnown RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 IFT22Q9H7X7 185 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 KIF25Q9UIL4 384 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 TENM1Q9UKZ4 2725 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 IGHV2-26A0A0B4J1V2 119 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 A0A1W2PP11 408 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ZNF729A6NN14 1252 aaPredicted RBP11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ODF3BA8MYP8 253 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 H3BUX3 64 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 CPEP16870 476 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 CDK2P24941 298 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 GLP1RP43220 463 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 RAG2P55895 527 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 GLT8D1Q68CQ7 371 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 HEPN1Q6WQI6 88 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 ZNF367Q7RTV3 350 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 LHFPL4Q7Z7J7 247 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 OR4F5Q8NH21 305 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 CLEC7AQ9BXN2 247 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 C1RLQ9NZP8 487 aa11.91□□□□□ -0.5
TUBA3D-201ENST00000321253 KIAA2026Q5HYC2 2103 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 ANK2Q01484 3957 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 DENRO43583 198 aaKnown RBP11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 CRTAPO75718 401 aaPredicted RBP11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 SC5DO75845 299 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 MMP23AO75900 390 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 SRMP19623 302 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 AANATQ16613 207 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 DHRS7BQ6IAN0 325 aaPredicted RBP11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 MALSU1Q96EH3 234 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 BEX1Q9HBH7 125 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 ZNF581Q9P0T4 197 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 GHRLQ9UBU3 117 aa11.9□□□□□ -0.5
TUBA3D-201ENST00000321253 KBTBD11-OT1A0A1B0GTJ5 212 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 A0A1B0GUS0 222 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 NDUFA7O95182 113 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 UCHL1P09936 223 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 MGMTP16455 207 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 MDKP21741 143 aaPredicted RBP11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 GP2P55259 537 aaKnown RBP11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 PAX5Q02548 391 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 SSX2Q16385 188 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 MINOS1Q5TGZ0 78 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 RSBN1Q5VWQ0 802 aaPredicted RBP11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 RTN4RL2Q86UN3 420 aa11.89□□□□□ -0.51
TUBA3D-201ENST00000321253 LYPD6Q86Y78 171 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms