RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 OPN4Q9UHM6 478 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 POLEQ07864 2286 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 DBX1A6NMT0 343 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 VSTM5A8MXK1 200 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 G3V3Q6 166 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 GOSR2O14653 212 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 GLRA1P23415 457 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 FCGR2CP31995 323 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 H2BFSP57053 126 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 LIN54Q6MZP7 749 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 C11orf88Q6PI97 169 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 ZNF826PQ6ZT77 177 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 OR4A4PQ8NGN8 299 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 LILRB4Q8NHJ6 448 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 RNASE6Q93091 150 aaKnown RBP15.06■□□□□ 0
RAB39A-201ENST00000320578 WFIKKN1Q96NZ8 548 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 DIRC2Q96SL1 478 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 SYT3Q9BQG1 590 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 LIME1Q9H400 295 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 C1orf123Q9NWV4 160 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 COQ3Q9NZJ6 369 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 PCDHB10Q9UN67 800 aa15.06■□□□□ 0
RAB39A-201ENST00000320578 NCOR2Q9Y618 2525 aa15.05■□□□□ 0
RAB39A-201ENST00000320578 HEATR1Q9H583 2144 aaKnown RBP15.05■□□□□ 0
RAB39A-201ENST00000320578 SRRM5B3KS81 715 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 ABCD4O14678 606 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 TK1P04183 234 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 ZNF728P0DKX0 622 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 RPS2P15880 293 aaKnown RBP15.05■□□□□ -0
RAB39A-201ENST00000320578 VAMP1P23763 118 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 PAX5Q02548 391 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 BSPH1Q075Z2 132 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 ESPL1Q14674 2120 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 LY6G6FQ5SQ64 297 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 VHLLQ6RSH7 139 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 UXS1Q8NBZ7 420 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 LRRC46Q96FV0 321 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 IL19Q9UHD0 177 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 WIPI2Q9Y4P8 454 aa15.05■□□□□ -0
RAB39A-201ENST00000320578 NPIPB11E5RHQ5 1161 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 ZNF81P51508 661 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 SUPT4H1P63272 117 aaKnown RBP15.04■□□□□ -0
RAB39A-201ENST00000320578 LAMTOR1Q6IAA8 161 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 CLEC18BQ6UXF7 455 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 SLC38A6Q8IZM9 456 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 C9orf62Q8N4C0 152 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 OR11H4Q8NGC9 324 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 CABLES2Q9BTV7 478 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 CHIAQ9BZP6 476 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 FXYD6Q9H0Q3 95 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 ESRP2Q9H6T0 727 aaKnown RBP15.04■□□□□ -0
RAB39A-201ENST00000320578 SLC23A1Q9UHI7 598 aa15.04■□□□□ -0
RAB39A-201ENST00000320578 SIRPB1O00241 398 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 HSPB6O14558 160 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 RGS13O14921 159 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 TUSC2O75896 110 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 CD8AP01732 235 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 TNFSF4P23510 183 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 PLA2G5P39877 138 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 HLA-DRB3P79483 266 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 SORDQ00796 357 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 NCMAPQ5T1S8 102 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 COQ8AQ8NI60 647 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 LRRC29Q8WV35 223 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 OR2V2Q96R30 315 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 GON7Q9BXV9 100 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 MBNL3Q9NUK0 354 aaKnown RBP15.03■□□□□ -0
RAB39A-201ENST00000320578 UFSP2Q9NUQ7 469 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 SHANK1Q9Y566 2161 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 LHBP01229 141 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 HERV-K104P61576 105 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 BAMBIQ13145 260 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 SLC35E4Q6ICL7 350 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 C20orf204Q6ZNR8 217 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 LILRB1Q8NHL6 650 aaPredicted RBP15.03■□□□□ -0
RAB39A-201ENST00000320578 RSRP1Q9BUV0 290 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 SLA2Q9H6Q3 261 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 RAB18Q9NP72 206 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 NDRG3Q9UGV2 375 aa15.03■□□□□ -0
RAB39A-201ENST00000320578 hCG_1807616A0A1W2PRN6 198 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 CRYM-AS1A6NIL9 109 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 WNT9BO14905 357 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 PPYP01298 95 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 CD55P08174 381 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 SCTP09683 121 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 IFITM2Q01629 132 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 IGSF11Q5DX21 431 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 DCAF12L2Q5VW00 463 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 SGPP2Q8IWX5 399 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 FAM185AQ8N0U4 392 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 PLPPR1Q8TBJ4 325 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 Q8TCH9 128 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 GALNT14Q96FL9 552 aa15.02■□□□□ -0
RAB39A-201ENST00000320578 PAIP2BQ9ULR5 123 aaKnown RBP15.02■□□□□ -0
RAB39A-201ENST00000320578 IGHV3-64DA0A0J9YX35 117 aa15.01□□□□□ -0.01
RAB39A-201ENST00000320578 MED19A0JLT2 244 aaPredicted RBP15.01□□□□□ -0.01
RAB39A-201ENST00000320578 HMSDA8MTL9 139 aa15.01□□□□□ -0.01
RAB39A-201ENST00000320578 SIX6O95475 246 aa15.01□□□□□ -0.01
RAB39A-201ENST00000320578 IGHV1-46P01743 117 aa15.01□□□□□ -0.01
RAB39A-201ENST00000320578 AADACP22760 399 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms