RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 TRAV21A0A0B4J279 112 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 TSPOP30536 169 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 JMJD6Q6NYC1 403 aaPredicted RBP11.75□□□□□ -0.53
AFF3-201ENST00000317233 BCDIN3DQ7Z5W3 292 aaKnown RBP11.75□□□□□ -0.53
AFF3-201ENST00000317233 PDLIM5Q96HC4 596 aaKnown RBP11.75□□□□□ -0.53
AFF3-201ENST00000317233 DUX5Q96PT3 197 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 CLN8Q9UBY8 286 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 LRRK1Q38SD2 2015 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 DCCP43146 1447 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 MBLAC1A4D2B0 266 aaPredicted RBP11.75□□□□□ -0.53
AFF3-201ENST00000317233 IFITM5A6NNB3 132 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 ZNF137PP52743 207 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 SPICQ8N5J4 248 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 SBK3P0C264 359 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 TMEM33P57088 247 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 MRGPRDQ8TDS7 321 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 SDF2Q99470 211 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 TMPRSS13Q9BYE2 586 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
AFF3-201ENST00000317233 IGHV3-43A0A0B4J1X8 118 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 IGHV3-43DP0DP04 118 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 METRNLQ641Q3 311 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 MCHR2Q969V1 340 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 RER1O15258 196 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 GABRA1P14867 456 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 OR10J1P30954 320 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 STARD6P59095 220 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 ZNF56Q15929 161 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 FAM74A3Q4VXF1 159 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 VRK3Q8IV63 474 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 NIPSNAP1Q9BPW8 284 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 ALG1L2C9J202 215 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 MRGPREQ86SM8 312 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 LINC00862A6NCI5 91 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 POM121BA6NF01 834 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
AFF3-201ENST00000317233 GALNSP34059 522 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
AFF3-201ENST00000317233 DUSP8Q13202 625 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 NSUN5P2Q63ZY6 315 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 LHFPL5Q8TAF8 219 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 HARBI1Q96MB7 349 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 GSCP56915 257 aaPredicted RBP11.74□□□□□ -0.53
AFF3-201ENST00000317233 ARRDC1Q8N5I2 433 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 FOXB1Q99853 325 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 MEX3AA1L020 520 aaKnown RBP11.74□□□□□ -0.53
AFF3-201ENST00000317233 CCR2P41597 374 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 CDC20Q12834 499 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 ZNF385DQ9H6B1 395 aa11.74□□□□□ -0.53
AFF3-201ENST00000317233 BTG2P78543 158 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 FAAP20Q6NZ36 180 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 BHLHA15Q7RTS1 189 aaPredicted RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 CXorf1O96002 111 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 ZC3H3Q8IXZ2 948 aaKnown RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 PRRX2Q99811 253 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 PHF7Q9BWX1 381 aaPredicted RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 ACER3Q9NUN7 267 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 TMEM129A0AVI4 362 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 SLC17A2O00624 439 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 CSF2RBP32927 897 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 PPICP45877 212 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 DYNLT3P51808 116 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 DLK1P80370 383 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 MAFAQ8NHW3 353 aaPredicted RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 ALX4Q9H161 411 aaPredicted RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 CMC2Q9NRP2 79 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 GABRB1P18505 474 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
AFF3-201ENST00000317233 DGCR2P98153 550 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 C12orf54Q6X4T0 127 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 SLCO4C1Q6ZQN7 724 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 PARM1Q6UWI2 310 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 RNF165Q6ZSG1 346 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 NANOGP1Q8N7R0 232 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 OR10AC1Q8NH08 325 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 MAP1LC3AQ9H492 121 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 HIGD1AQ9Y241 93 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 A0A1W2PR80 420 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 TMEM189A5PLL7 270 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 TMEM189-UBE2V1I3L0A0 370 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 UPK1AO00322 258 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 FUCA1P04066 466 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 VEGFBP49765 207 aa11.73□□□□□ -0.53
AFF3-201ENST00000317233 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms