RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 NOXO1Q8NFA2 376 aa7.77□□□□□ -1.17
USF3-201ENST00000316407 RARRES2Q99969 163 aa7.77□□□□□ -1.17
USF3-201ENST00000316407 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
USF3-201ENST00000316407 PLXND1Q9Y4D7 1925 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 GALNSP34059 522 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 DCAF12Q5T6F0 453 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 OR2Y1Q8NGV0 311 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 SPAG8Q99932 426 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 CD81P60033 236 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 C1QL1O75973 258 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 CA3P07451 260 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 OR8I2Q8N0Y5 310 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 LYRM4Q9HD34 91 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 Q9Y3F1 56 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ABCA4P78363 2273 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 GCGP01275 180 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ICAM2P13598 275 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 EPHA8P29322 1005 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 Q7L0L9 218 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 OR2Z1Q8NG97 314 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 SOSTQ9BQB4 213 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 C19orf53Q9UNZ5 99 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 GVINP1Q7Z2Y8 2422 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 HERVK_113P61574 105 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 EXT1Q16394 746 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 A0A1B0GX78 115 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ZNF716A6NP11 495 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 RPS4Y1P22090 263 aaKnown RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 LYG1Q8N1E2 194 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 DMRT1Q9Y5R6 373 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 RAG2P55895 527 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ADAMTS17Q8TE56 1095 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 SBF2Q86WG5 1849 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 RGS7BPQ6MZT1 257 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 IGKV3-7A0A075B6H7 116 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 GSTZ1O43708 216 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 ACP1P24666 158 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 FGF9P31371 208 aaPredicted RBP7.76□□□□□ -1.17
USF3-201ENST00000316407 IL13RA2Q14627 380 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 CST9Q5W186 159 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 NGBQ9NPG2 151 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 HS3ST2Q9Y278 367 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 UPK1AO00322 258 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 PLPP2O43688 288 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 IL24Q13007 206 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ZNF79Q15937 498 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 ACER2Q5QJU3 275 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 CHAC2Q8WUX2 184 aa7.76□□□□□ -1.17
USF3-201ENST00000316407 TRAV8-7A0A075B6U6 113 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 IGSF23A1L1A6 192 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 IL10RAQ13651 578 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 OR4B1Q8NGF8 309 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 MIXL1Q9H2W2 232 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 GPR27Q9NS67 375 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 DAPP1Q9UN19 280 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 CACNA1GO43497 2377 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TRGV10A0A0A0MS01 117 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 IGHV3-21A0A0B4J1V1 117 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ARF6P62330 175 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PPP2CBP62714 309 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 CD226Q15762 336 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TEX30Q5JUR7 227 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 SH2D5Q6ZV89 423 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 STPG2Q8N412 459 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TBC1D29Q9UFV1 150 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 OR2W1Q9Y3N9 320 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 SNAI2O43623 268 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 LMX1BO60663 402 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 NPBWR2P48146 333 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 DGAT2L7PQ6IED9 249 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 LURAP1LQ8IV03 231 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 SMPD2O60906 423 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 FGF2P09038 288 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 RUNX1Q01196 453 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 FAM78AQ5JUQ0 283 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ZNF362Q5T0B9 420 aaPredicted RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 SLC35E3Q7Z769 313 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 DOLPP1Q86YN1 238 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 BAHD1Q8TBE0 780 aaPredicted RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 WDR13Q9H1Z4 485 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 SH3BGRL3Q9H299 93 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TANC2Q9HCD6 1990 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ARR3P36575 388 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 WNT5AP41221 380 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 FGF13Q92913 245 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 VSIG4Q9Y279 399 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 BTAF1O14981 1849 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 SLC25A17O43808 307 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PGA4P0DJD7 388 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PGA5P0DJD9 388 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 FUT3P21217 361 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ST6GALNAC6Q969X2 333 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 IL36GQ9NZH8 169 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms