RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RNF126Q9BV68 326 aa15.58■□□□□ 0.08
CCDC43-201ENST00000315286 RIMS4Q9H426 269 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-201ENST00000315286 NAA60Q9H7X0 242 aa15.58■□□□□ 0.08
CCDC43-201ENST00000315286 SLC2A9Q9NRM0 540 aa15.58■□□□□ 0.08
CCDC43-201ENST00000315286 ATP23Q9Y6H3 246 aa15.58■□□□□ 0.08
CCDC43-201ENST00000315286 K7ENP7 123 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 KCNAB3O43448 404 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 ZNF83P51522 516 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 NAAAQ02083 359 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 BEX5Q5H9J7 111 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 CLLU1Q5K131 121 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 TIMM23BQ5SRD1 257 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 ACOT7LQ6ZUV0 252 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 SLC38A6Q8IZM9 456 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 OR11L1Q8NGX0 322 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 C2orf50Q96LR7 162 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 CITED4Q96RK1 184 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 VRK1Q99986 396 aaPredicted RBP15.57■□□□□ 0.08
CCDC43-201ENST00000315286 RSRP1Q9BUV0 290 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 SFXN3Q9BWM7 321 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 GSX2Q9BZM3 304 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 KCNIP3Q9Y2W7 256 aa15.57■□□□□ 0.08
CCDC43-201ENST00000315286 IGKV1-6A0A0C4DH72 117 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 KIR2DS1A0A191URI9 304 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 H0YIZ8 118 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 GFRA3O60609 400 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 OR2F2O95006 317 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 NXPH2O95156 264 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 TK1P04183 234 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 GCH1P30793 250 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 KIR2DS4P43632 304 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 TDGF1P3P51864 188 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 OR2F1Q13607 317 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 ZNF345Q14585 488 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 KIR2DS1Q14954 304 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 C11orf53Q8IXP5 236 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 MSL2Q9HCI7 577 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 PTPRQQ9UMZ3 2332 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 TRBV6-6A0A0A6YYG2 114 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-201ENST00000315286 LINC00862A6NCI5 91 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 SIRPB1O00241 398 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 OR2H2O95918 312 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 OR5AC1P0C628 307 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 RCC1P18754 421 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-201ENST00000315286 IL15RAQ13261 267 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 MBNL2Q5VZF2 373 aaKnown RBP15.56■□□□□ 0.08
CCDC43-201ENST00000315286 ALKAL2Q6UX46 152 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 ZNF826PQ6ZT77 177 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 POC1AQ8NBT0 407 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 RASL12Q9NYN1 266 aa15.56■□□□□ 0.08
CCDC43-201ENST00000315286 SLC33A1O00400 549 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-201ENST00000315286 HOXD4P09016 255 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-201ENST00000315286 TMEM187Q14656 261 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 ZNF146Q15072 292 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 PAN3Q58A45 887 aaKnown RBP15.55■□□□□ 0.08
CCDC43-201ENST00000315286 ZNF880Q6PDB4 577 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 SLC51BQ86UW2 128 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 DOLPP1Q86YN1 238 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 FAM219AQ8IW50 185 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 GALNT14Q96FL9 552 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 SLX1AQ9BQ83 275 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 CXXC4Q9H2H0 198 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 GSKIPQ9P0R6 139 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 MSRB2Q9Y3D2 182 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 TRBV6-7A0A0A0MS04 114 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 M0R1B8 84 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 B3GALNT1O75752 331 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 SPDEFO95238 335 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 GNRHRP30968 328 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 RAB14P61106 215 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 INO80EQ8NBZ0 244 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-201ENST00000315286 SYT3Q9BQG1 590 aa15.55■□□□□ 0.08
CCDC43-201ENST00000315286 LEUTXA8MZ59 168 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 DIRAS3O95661 229 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 ACAA1P09110 424 aaPredicted RBP15.54■□□□□ 0.08
CCDC43-201ENST00000315286 HOXA4Q00056 320 aaPredicted RBP15.54■□□□□ 0.08
CCDC43-201ENST00000315286 MSMPQ1L6U9 139 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 PRAMEF6Q5VXH4 476 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 C1orf174Q8IYL3 243 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 PLPPR1Q8TBJ4 325 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 DCUN1D4Q92564 292 aa15.54■□□□□ 0.08
CCDC43-201ENST00000315286 MRPL24Q96A35 216 aaKnown RBP15.54■□□□□ 0.08
CCDC43-201ENST00000315286 KANTRA0A1W2PQU2 76 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 A8MXE2 369 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 PRRG2O14669 202 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 CTXN2P0C2S0 81 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 BMP5P22003 454 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 KCNJ3P48549 501 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 FAM27E3Q08E93 113 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 RAB32Q13637 225 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 GGNBP1Q5YKI7 109 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 MUCL1Q96DR8 90 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 HES4Q9HCC6 221 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 SH2D1BO14796 132 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 WNT9BO14905 357 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 TUSC2O75896 110 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 IAH1Q2TAA2 248 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-201ENST00000315286 RGS7BPQ6MZT1 257 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms