RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ZNF391Q9UJN7 358 aa21.74■■□□□ 1.07
HOXB3-201ENST00000311626 KNTC1P50748 2209 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 CST7O76096 145 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 ZNF44P15621 663 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 CBR1P16152 277 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 UCP3P55916 312 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 CCL20P78556 96 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 SHEQ5VZ18 495 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 MRPL21Q7Z2W9 205 aaKnown RBP21.73■■□□□ 1.07
HOXB3-201ENST00000311626 TMEM217Q8N7C4 229 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 BOD1Q96IK1 185 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 C12orf57Q99622 126 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 TMEM222Q9H0R3 208 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 BIN3Q9NQY0 253 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 SMCO4Q9NRQ5 59 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 NCOR1O75376 2440 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 HS3ST1O14792 307 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 SERPINA7P05543 415 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 HEXAP06865 529 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 MAGEA5P43359 124 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 LINC00696Q6ZRV3 163 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 ZNF565Q8N9K5 539 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 ZFP62Q8NB50 900 aaPredicted RBP21.73■■□□□ 1.07
HOXB3-201ENST00000311626 CD300LFQ8TDQ1 290 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 REPIN1Q9BWE0 567 aaKnown RBP21.73■■□□□ 1.07
HOXB3-201ENST00000311626 PRDM14Q9GZV8 571 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 TMED3Q9Y3Q3 217 aa21.73■■□□□ 1.07
HOXB3-201ENST00000311626 TRAV39A0A0B4J263 110 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 IGKV1-6A0A0C4DH72 117 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 HABP2Q14520 560 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-201ENST00000311626 SSPNQ14714 243 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 C20orf204Q6ZNR8 217 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 C17orf78Q8N4C9 275 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 OR2C3Q8N628 320 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 Q9N2K0 584 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 C7orf77A4D0Y5 90 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 NKX2-1P43699 371 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-201ENST00000311626 SELENOHQ8IZQ5 122 aaKnown RBP21.72■■□□□ 1.07
HOXB3-201ENST00000311626 LILRB1Q8NHL6 650 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-201ENST00000311626 KPTNQ9Y664 436 aa21.72■■□□□ 1.07
HOXB3-201ENST00000311626 ZNF724A8MTY0 619 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 NEURL1O76050 574 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 IGHEP01854 428 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 ARG1P05089 322 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 HOXA6P31267 233 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 HOXA1P49639 335 aaPredicted RBP21.71■■□□□ 1.07
HOXB3-201ENST00000311626 LHX2P50458 406 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 SNRPEP62304 92 aaKnown RBP21.71■■□□□ 1.07
HOXB3-201ENST00000311626 KRBOX4Q5JUW0 171 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 COLCA1Q6ZS62 124 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 OR2M7Q8NG81 312 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 TMEM171Q8WVE6 324 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 RDH5Q92781 318 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 MED13Q9UHV7 2174 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 A0A1W2PPH5 198 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 SLC22A20A6NK97 555 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 A6NLC8 198 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 IZUMO4Q1ZYL8 232 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 UBALD2Q8IYN6 164 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 HIST1H2BAQ96A08 127 aa21.71■■□□□ 1.07
HOXB3-201ENST00000311626 TK1P04183 234 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 IGHV3-64DA0A0J9YX35 117 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM50AO95807 157 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 CEBPGP53567 150 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 ZDHHC23Q8IYP9 409 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 UBALD1Q8TB05 177 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 GLRX2Q9NS18 164 aa21.7■■□□□ 1.06
HOXB3-201ENST00000311626 UMAD1C9J7I0 102 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 ATP6V0CP27449 155 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 OR2G3Q8NGZ4 309 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 COA4Q9NYJ1 87 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 FOXJ2Q9P0K8 574 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 BOKQ9UMX3 212 aaPredicted RBP21.69■■□□□ 1.06
HOXB3-201ENST00000311626 B4E171 279 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 EPHA1P21709 976 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 TSPAN7P41732 249 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 CLDN18P56856 261 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 RAB1AP62820 205 aa21.69■■□□□ 1.06
HOXB3-201ENST00000311626 ARGFXA6NJG6 315 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 PROB1E7EW31 1015 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 FGF12P61328 243 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 RUNX1Q01196 453 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 SPATA46Q5T0L3 261 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 ZNF703Q9H7S9 590 aaPredicted RBP21.68■■□□□ 1.06
HOXB3-201ENST00000311626 hCG_1809904A0A1W2PP81 198 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 A0A1W2PPE3 182 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 A0A1W2PR64 198 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 A0A1W2PRV1 198 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 TRAPPC2LH3BP13 241 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 SFT2D1Q8WV19 159 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 C11orf1Q9H5F2 150 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 C12orf49Q9H741 205 aa21.68■■□□□ 1.06
HOXB3-201ENST00000311626 NAPSAO96009 420 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 CEACAM21Q3KPI0 293 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 NUFIP2Q7Z417 695 aaKnown RBP21.67■■□□□ 1.06
HOXB3-201ENST00000311626 ODF3L1Q8IXM7 274 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 OR5C1Q8NGR4 320 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 FAM86C1Q9NVL1 165 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 ESPL1Q14674 2120 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 A0A1W2PPE2 198 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms