RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MPV17LQ2QL34 196 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 OR4A47Q6IF82 309 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TMEM91Q6ZNR0 172 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TMEM123Q8N131 208 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 OR51D1Q8NGF3 324 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CIB3Q96Q77 187 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ZNF701Q9NV72 531 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 MMP24Q9Y5R2 645 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 KLF2Q9Y5W3 355 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 MDC1Q14676 2089 aaKnown RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ASXL3Q9C0F0 2248 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 A0A1W2PN81 502 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 C5orf49A4QMS7 147 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 LRRC3CA6NJW4 275 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 SHISA8B8ZZ34 492 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 NKX2-8O15522 239 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TK1P04183 234 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CELA2AP08217 269 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CCL1P22362 96 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CFPP27918 469 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CD80P33681 288 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CHRNA7P36544 502 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 WNT5AP41221 380 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 SELENOPP49908 381 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 LHX2P50458 406 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 FGF8P55075 233 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 GFRA1P56159 465 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 PIGPP57054 158 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 PLP1P60201 277 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CKS1BP61024 79 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TMEM30BQ3MIR4 351 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 RGS7BPQ6MZT1 257 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TOMM20LQ6UXN7 152 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TRAPPC6BQ86SZ2 158 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 LDLRAD3Q86YD5 345 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 SGPP2Q8IWX5 399 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 PRSS33Q8NF86 280 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 OR8B12Q8NGG6 310 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 OR1K1Q8NGR3 316 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 OR13G1Q8NGZ3 307 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 RNF141Q8WVD5 230 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ZNF385AQ96PM9 386 aaKnown RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 VAMP8Q9BV40 100 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TMEM100Q9NV29 134 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 MYO15AQ9UKN7 3530 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 KNTC1P50748 2209 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 IGHV3-15A0A0B4J1V0 119 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 A0A1B0GV50 99 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 MSTNO14793 375 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 SH2D1BO14796 132 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 TNFRSF1AP19438 455 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 CLDN18P56856 261 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 HIST3H3Q16695 136 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 SLC25A35Q3KQZ1 300 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 IGFL2Q6UWQ7 119 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ZDHHC22Q8N966 263 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 FRZBQ92765 325 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ALKBH3Q96Q83 286 aaPredicted RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ABHD1Q96SE0 405 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 PATZ1Q9HBE1 687 aaKnown RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ENY2Q9NPA8 101 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 FAM206AQ9NX38 181 aa5.24□□□□□ -1.57
SEC22A-201ENST00000309934 MRPL15Q9P015 296 aaKnown RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 LSM5Q9Y4Y9 91 aaKnown RBP5.24□□□□□ -1.57
SEC22A-201ENST00000309934 ZNF44P15621 663 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 RPA2P15927 270 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 IL13RA2Q14627 380 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 GUCA2BQ16661 112 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 CST9LP1Q5W188 147 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 Q6ZT83 130 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 CMTM4Q8IZR5 234 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 OSR2Q8N2R0 312 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 OR4K15Q8NH41 348 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 OR2AE1Q8NHA4 323 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 RND1Q92730 232 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 RNF170Q96K19 258 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 TIMP4Q99727 224 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 MESP1Q9BRJ9 268 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 MEGF9Q9H1U4 602 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 CXXC4Q9H2H0 198 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 DKK4Q9UBT3 224 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 FBXO7Q9Y3I1 522 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 A0A1B0GUH1 482 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 H7C417 338 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 UBE2CO00762 179 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 RER1O15258 196 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 HLA-DQB1P01920 261 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 LIPFP07098 398 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 NMBP08949 121 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 BLVRBP30043 206 aaPredicted RBP5.23□□□□□ -1.57
SEC22A-201ENST00000309934 CLDN20P56880 219 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 HERPUD1Q15011 391 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 SMIM21Q3B7S5 101 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 GLCCI1Q86VQ1 547 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 DUSP18Q8NEJ0 188 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 OR1J1Q8NGS3 322 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 FNDC9Q8TBE3 224 aa5.23□□□□□ -1.57
SEC22A-201ENST00000309934 FAM57AQ8TBR7 257 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms