RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZNF826PQ6ZT77 177 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 C5orf24Q7Z6I8 188 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 LRP11Q86VZ4 500 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 COMMD9Q9P000 198 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 C13orf42A0A1B0GVH6 325 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 C5orf51A6NDU8 294 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 CRYM-AS1A6NIL9 109 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 SIRPB1O00241 398 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 SLC33A1O00400 549 aaPredicted RBP18■□□□□ 0.47
ATG4D-201ENST00000309469 SH2D1BO14796 132 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 PAN3Q58A45 887 aaKnown RBP18■□□□□ 0.47
ATG4D-201ENST00000309469 PRAMEF6Q5VXH4 476 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 PIK3IP1Q96FE7 263 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 USB1Q9BQ65 265 aaKnown RBP18■□□□□ 0.47
ATG4D-201ENST00000309469 TEX13DA0A0J9YY54 714 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-201ENST00000309469 A6NLC8 198 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 C16orf97H3BN30 126 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 CCKARP32238 428 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 MDH2P40926 338 aaKnown RBP17.99■□□□□ 0.47
ATG4D-201ENST00000309469 PIGPP57054 158 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 HERV-K104P61576 105 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 MZT1Q08AG7 82 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 ZNF880Q6PDB4 577 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 FIP1L1Q6UN15 594 aaKnown RBP17.99■□□□□ 0.47
ATG4D-201ENST00000309469 TMUB2Q71RG4 321 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 OR8H3Q8N146 312 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 RELL2Q8NC24 303 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-201ENST00000309469 PPP1R1CQ8WVI7 109 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 TREM2Q9NZC2 230 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 JKAMPQ9P055 326 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 UBQLN2Q9UHD9 624 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 ATMQ13315 3056 aa17.99■□□□□ 0.47
ATG4D-201ENST00000309469 DSPP15924 2871 aaKnown RBP17.99■□□□□ 0.47
ATG4D-201ENST00000309469 DLL1O00548 723 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 ADAP1O75689 374 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 PPYP01298 95 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 IGHV3-13P01766 116 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 TK1P04183 234 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 CTXN2P0C2S0 81 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 RPA2P15927 270 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 ABCA11PQ4W5N1 156 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 WDR82Q6UXN9 313 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 SLC38A6Q8IZM9 456 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 OR5T2Q8NGG2 359 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 MAB21L2Q9Y586 359 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 BET1O15155 118 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 HERPUD1Q15011 391 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 SHEQ5VZ18 495 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 ARL6Q9H0F7 186 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 UFSP2Q9NUQ7 469 aa17.98■□□□□ 0.47
ATG4D-201ENST00000309469 ESPL1Q14674 2120 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 POM121CA8CG34 1229 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 ATP6V1G2-DDX39BF2Z307 99 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 CFDP00746 253 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-201ENST00000309469 SLC25A4P12235 298 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 RBMXP38159 391 aaKnown RBP17.97■□□□□ 0.47
ATG4D-201ENST00000309469 LRRC37A5PQ49AS3 106 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 C6orf183Q5T699 404 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 C11orf87Q6NUJ2 197 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 TMEM65Q6PI78 240 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 VHLLQ6RSH7 139 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 OR2Z1Q8NG97 314 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 TMEM171Q8WVE6 324 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 RSRP1Q9BUV0 290 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 NMES1Q9C002 83 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 MFFQ9GZY8 342 aa17.97■□□□□ 0.47
ATG4D-201ENST00000309469 IGKV1-6A0A0C4DH72 117 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 H7C1Q1 480 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 WNT9BO14905 357 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 RP2O75695 350 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 DIRAS3O95661 229 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 HAND1O96004 215 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 RCC1P18754 421 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-201ENST00000309469 CD40P25942 277 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 KLF3P57682 345 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-201ENST00000309469 CYCSP99999 105 aaKnown RBP17.96■□□□□ 0.47
ATG4D-201ENST00000309469 ZNF546Q86UE3 836 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 PLPPR1Q8TBJ4 325 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 RTN4IP1Q8WWV3 396 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-201ENST00000309469 NAA60Q9H7X0 242 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 METTL8Q9H825 291 aaKnown RBP17.96■□□□□ 0.47
ATG4D-201ENST00000309469 C1orf123Q9NWV4 160 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 RASL12Q9NYN1 266 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 GLS2Q9UI32 602 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 KCNIP3Q9Y2W7 256 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 PHLDA2Q53GA4 152 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 ZNF497Q6ZNH5 498 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 SYT3Q9BQG1 590 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 SLC2A9Q9NRM0 540 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 RDH8Q9NYR8 311 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 OR14J1Q9UGF5 321 aa17.96■□□□□ 0.47
ATG4D-201ENST00000309469 PRR14LQ5THK1 2151 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 ANKRD34BA5PLL1 514 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 CD200P41217 278 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 RPS23P62266 143 aaKnown RBP17.95■□□□□ 0.46
ATG4D-201ENST00000309469 HLA-DRB3P79483 266 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 ACP7Q6ZNF0 438 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 GAPTQ8N292 157 aa17.95■□□□□ 0.46
ATG4D-201ENST00000309469 OR4A4PQ8NGN8 299 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms