RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PRTN3P24158 256 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GADD45AP24522 165 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GLP1RP43220 463 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KLRD1Q13241 179 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 P2RY14Q15391 338 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 HES5Q5TA89 166 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 METAP1DQ6UB28 335 aaPredicted RBP9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BRD3OSQ6XYD6 125 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR2W3Q7Z3T1 314 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PDZD9Q8IXQ8 264 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 Q8N7P7 452 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TMEM104Q8NE00 496 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 Q96M66 194 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C1orf147Q96MC9 270 aaPredicted RBP9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NEDD4LQ96PU5 975 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GFI1Q99684 422 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 URM1Q9BTM9 101 aaKnown RBP9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF69Q9UC07 566 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A0A6YYJ9 748 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TMEM30CPA0ZSE6 113 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MEX3AA1L020 520 aaKnown RBP9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CLPXO76031 633 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 JUNBP17275 347 aaPredicted RBP9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 GLIPR1P48060 266 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR10A3P58181 314 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RAB12Q6IQ22 244 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF782Q6ZMW2 699 aaPredicted RBP9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 GDPGP1Q6ZNW5 385 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C9orf139Q6ZV77 190 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TPRA1Q86W33 373 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PRIMA1Q86XR5 153 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR51D1Q8NGF3 324 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 COQ2Q96H96 371 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 KCNK15Q9H427 330 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 HEXA-AS1Q9H8Q6 139 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 UNKLQ9H9P5 680 aaKnown RBP9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TAS2R3Q9NYW6 316 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PEX16Q9Y5Y5 336 aa9.02□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SHISA3A0PJX4 238 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TRIM64CA6NLI5 447 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF729A6NN14 1252 aaPredicted RBP9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NOTOA8MTQ0 251 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 C17orf98A8MV24 154 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TMEM14DPA8MWL7 114 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RNASEK-C17orf49H0YIS7 233 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 AIPO00170 330 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 AIREO43918 545 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PDCD6O75340 191 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FUT3P21217 361 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 COX7A1P24310 79 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 UBE2E1P51965 193 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 DLX1P56177 255 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CLDN12P56749 244 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RPS27AP62979 156 aaKnown RBP9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PAX5Q02548 391 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PRB3Q04118 309 aaPredicted RBP9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RSBN1Q5VWQ0 802 aaPredicted RBP9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR10K2Q6IF99 312 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 USP43Q70EL4 1123 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF565Q8N9K5 539 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR13D1Q8NGV5 346 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PLPPR1Q8TBJ4 325 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SLC25A28Q96A46 364 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FAM3DQ96BQ1 224 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 TM2D1Q9BX74 207 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NCOR1P1Q9H4R4 102 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ETAA1Q9NY74 926 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 RCC2Q9P258 522 aaKnown RBP9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 FAM96BQ9Y3D0 163 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SESN1Q9Y6P5 492 aa9.01□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A1W2PRD5 423 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A1W2PRF3 423 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 A0A1W2PRM7 423 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IFITM5A6NNB3 132 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 NPFFO15130 113 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 PAHP00439 452 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 GLAP06280 429 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SMIM18P0DKX4 95 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 CD37P11049 281 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SDC2P34741 201 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 LGALS4P56470 323 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MXD1Q05195 221 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 UNC119Q13432 240 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SLC35E4Q6ICL7 350 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 OR52W1Q6IF63 320 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 BCL6BQ8N143 479 aaPredicted RBP9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 SIGLECL1Q8N7X8 197 aa9□□□□□ -0.97
CSPG4P1Y-201ENST00000306641 MRGPRDQ8TDS7 321 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms