RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KLK11Q9UBX7 282 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TRDCB7Z8K6 153 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TGFAP01135 160 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 KLK2P20151 261 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 KIR2DS2P43631 304 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 NANOS3P60323 173 aaKnown RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 RAP2BP61225 183 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 FAAP20Q6NZ36 180 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 DYNC2LI1Q8TCX1 351 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 CLPSP04118 112 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 PTGDSP41222 190 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 ARF6P62330 175 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 FAM3AP98173 230 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM267Q0VDI3 215 aaPredicted RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 IL13RA2Q14627 380 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SP5Q6BEB4 398 aaPredicted RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM123Q8N131 208 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 RFLNBQ8N5W9 214 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TPRX1Q8N7U7 411 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SNX22Q96L94 193 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 CIB3Q96Q77 187 aaPredicted RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF426Q9BUY5 554 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 PKIBQ9C010 78 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 IGKV3D-15A0A087WSY6 115 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 RPS27AP62979 156 aaKnown RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SORDQ00796 357 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 Q6ZRG5 221 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM229BQ8NBD8 167 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SMIM4Q8WVI0 70 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 MRPL24Q96A35 216 aaKnown RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 MEGF10Q96KG7 1140 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 THYN1Q9P016 225 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 NOTCH2Q04721 2471 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TRAV39A0A0B4J263 110 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 DHRS7CA6NNS2 312 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 TRIM77I1YAP6 450 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 CELA3BP08861 270 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 MPV17P39210 176 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 RBM11P57052 281 aaKnown RBP7.97□□□□□ -1.13
PTPRE-202ENST00000306042 ERVS71-1P61550 626 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SPANXN5Q5MJ07 72 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 OR14K1Q8NGZ2 314 aa7.97□□□□□ -1.13
PTPRE-202ENST00000306042 SOCS1O15524 211 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 CDH26Q8IXH8 852 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 MOB3AQ96BX8 217 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 RBMXL1Q96E39 390 aaKnown RBP7.96□□□□□ -1.13
PTPRE-202ENST00000306042 DDOQ99489 341 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 NPAS1Q99742 590 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 RASL12Q9NYN1 266 aa7.96□□□□□ -1.13
PTPRE-202ENST00000306042 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 C17orf100A8MU93 164 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 SYNGR1O43759 233 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 NPIPB7O75200 414 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 LGALS7P47929 136 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 FGF12P61328 243 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 CLINT1Q14677 625 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 NUP37Q8NFH4 326 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 OR4S2Q8NH73 311 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 PBDC1Q9BVG4 233 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 FAM206AQ9NX38 181 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 PIPOXQ9P0Z9 390 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF407Q9C0G0 2248 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 M0R036 132 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 CLEC3BP05452 202 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 LIPFP07098 398 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 LINC01590Q5TEZ4 76 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 OR4C16Q8NGL9 310 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 VOPP1Q96AW1 172 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 SEC22CQ9BRL7 303 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 KCNK15Q9H427 330 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 RALYQ9UKM9 306 aaKnown RBP7.96□□□□□ -1.14
PTPRE-202ENST00000306042 HILPDAQ9Y5L2 63 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 KIF26BQ2KJY2 2108 aa7.96□□□□□ -1.14
PTPRE-202ENST00000306042 IGKV1D-43A0A0B4J1Z2 117 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 DYRK1AQ13627 763 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 OR1S2Q8NGQ3 325 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 MARS2Q96GW9 593 aaKnown RBP7.95□□□□□ -1.14
PTPRE-202ENST00000306042 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 GHITMQ9H3K2 345 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 AK3Q9UIJ7 227 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 ST6GALNAC2Q9UJ37 374 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 RPS10-NUDT3A0A1W2PQS6 291 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 ZFP92A6NM28 416 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 EFNA2O43921 213 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 CRYZL1O95825 349 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 VSIG8P0DPA2 414 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 PTHLHP12272 177 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 MUC1P15941 1255 aaPredicted RBP7.95□□□□□ -1.14
PTPRE-202ENST00000306042 ADRA2CP18825 462 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 TNXAQ16473 311 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 OR5AP2Q8NGF4 316 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 TMUB1Q9BVT8 246 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 SIRT7Q9NRC8 400 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 FKBP11Q9NYL4 201 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms