RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 MYF5P13349 255 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 BMP5P22003 454 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 SRD5A2P31213 254 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 PTPMT1Q8WUK0 201 aaPredicted RBP11.29□□□□□ -0.6
COL3A1-201ENST00000304636 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 DEFB108AA8MXU0 73 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 LINC01565O15544 149 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 ERGP11308 486 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 MRPL30Q8TCC3 161 aaKnown RBP11.29□□□□□ -0.6
COL3A1-201ENST00000304636 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 RNF2Q99496 336 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 SCN4AP35499 1836 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 TRBV5-7A0A0A0MS05 114 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 M0R2Z0 102 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 CYB5R3P00387 301 aaPredicted RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 F2RP25116 425 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 HOXA6P31267 233 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 RAC3P60763 192 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 NHLH1Q02575 133 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 NHLH2Q02577 135 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 C19orf48Q6RUI8 117 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 CXorf67Q86X51 503 aaPredicted RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 BCL2P10415 239 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR3A1P47881 315 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 IL11RAQ14626 422 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 Q5BKY6 102 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 SPINK9Q5DT21 86 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR13G1Q8NGZ3 307 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 COL9A1P20849 921 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR5D13Q8NGL4 314 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 RFESDQ8TAC1 157 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 PAGE4O60829 102 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 MMP9P14780 707 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM52Q8NDY8 209 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 TECRQ9NZ01 308 aaKnown RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 ATP23Q9Y6H3 246 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 MIA3Q5JRA6 1907 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 UPK3AO75631 287 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 IGKV1D-16P01601 117 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 HSPB1P04792 205 aaKnown RBP11.28□□□□□ -0.6
COL3A1-201ENST00000304636 MGAT2Q10469 447 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 SPEM1Q8N4L4 309 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 OR2W1Q9Y3N9 320 aa11.28□□□□□ -0.6
COL3A1-201ENST00000304636 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 BCL3P20749 454 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 FCARP24071 287 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 HTR1DP28221 377 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 OPRK1P41145 380 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 ROM1Q03395 351 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 AQP3Q92482 292 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 PLPPR2Q96GM1 343 aa11.27□□□□□ -0.6
COL3A1-201ENST00000304636 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 PIN1P1O15428 100 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL3A1-201ENST00000304636 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
COL3A1-201ENST00000304636 SERF2P84101 59 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 ZP4Q12836 540 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 KISS1RQ969F8 398 aaPredicted RBP11.27□□□□□ -0.61
COL3A1-201ENST00000304636 DTX4Q9Y2E6 619 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 HKR1P10072 659 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 SRSF5Q13243 272 aaKnown RBP11.27□□□□□ -0.61
COL3A1-201ENST00000304636 RHBDD2Q6NTF9 364 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 Q6ZS52 159 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 STARD4Q96DR4 205 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 POU2F2P09086 479 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.27□□□□□ -0.61
COL3A1-201ENST00000304636 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
COL3A1-201ENST00000304636 DXOO77932 396 aaKnown RBP11.26□□□□□ -0.61
COL3A1-201ENST00000304636 ZNF205O95201 554 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 SP1P08047 785 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 OR1C1Q15619 314 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 ABLIM2Q6H8Q1 611 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 OR2Z1Q8NG97 314 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
COL3A1-201ENST00000304636 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms