RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 IL22RA2Q969J5 263 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 HELTA6NFD8 242 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF383Q8NA42 475 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 TP53I13Q8NBR0 393 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 LNP1A1A4G5 178 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 C7orf77A4D0Y5 90 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 KLF3P57682 345 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 OR4D9Q8NGE8 314 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 PHF7Q9BWX1 381 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 ONECUT1Q9UBC0 465 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 PSG11Q9UQ72 335 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 MPDZO75970 2070 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 MFSD2BA6NFX1 497 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 VASH2Q86V25 355 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF738Q8NE65 137 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 SLC7A10Q9NS82 523 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 DNPH1O43598 174 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 LSM11P83369 360 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 SLC16A13Q7RTY0 426 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 MOB3BQ86TA1 216 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 OR8B12Q8NGG6 310 aa6.76□□□□□ -1.33
SF3B3-201ENST00000302516 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-201ENST00000302516 DOCK11Q5JSL3 2073 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 MPDU1O75352 247 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 CLDN18P56856 261 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 FNDC7Q5VTL7 733 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF774Q6NX45 483 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 RPEQ96AT9 228 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 R3HDM4Q96D70 268 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 NTMQ9P121 344 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 COL11A2P13942 1736 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 SRSF10O75494 262 aaKnown RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 KLF7O75840 302 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 G6PCP35575 357 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ACSM6Q6P461 480 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 CBLN2Q8IUK8 224 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM30AQ9NV96 361 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 AMDHD2Q9Y303 409 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 OR2W1Q9Y3N9 320 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 A0A0G2JMZ2 1700 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 LRRC37A2A6NM11 1700 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 CTLA4P16410 223 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 SRD5A2P31213 254 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 VAX1Q5SQQ9 334 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 RSPO2Q6UXX9 243 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 SPEM1Q8N4L4 309 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 OR1B1Q8NGR6 318 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 C5orf52A6NGY3 159 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 CYB5R3P00387 301 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 PSMB2P49721 201 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 GNB2P62879 340 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ERASQ7Z444 233 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ETFBKMTQ8IXQ9 262 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM116Q8NCL8 245 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 GPR27Q9NS67 375 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 WSB2Q9NYS7 404 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-201ENST00000302516 LTBP4Q8N2S1 1624 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 FMODQ06828 376 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ANKRD37Q7Z713 158 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 D2HGDHQ8N465 521 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 C8orf44Q96CB5 159 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 COX14Q96I36 57 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 DEFB127Q9H1M4 99 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 FRRS1LQ9P0K9 344 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 CXCL3P19876 107 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 MVDP53602 400 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ZIC1Q15915 447 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 HFEQ30201 348 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ORAI1Q96D31 301 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 DIRC2Q96SL1 478 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 TRBV5-3A0A0A0MS03 114 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF98A6NK75 572 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 MEOX1P50221 254 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 P2RX4Q99571 388 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 RSRP1Q9BUV0 290 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 SAP30LQ9HAJ7 183 aa6.75□□□□□ -1.33
SF3B3-201ENST00000302516 TRGV5A0A0B4J1U4 118 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 PPYP01298 95 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 BTF3P20290 206 aaKnown RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 GFERP55789 205 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 PABPC1L2AQ5JQF8 200 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 WDR74Q6RFH5 385 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 SIP14410 1827 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 CRYBA1P05813 215 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 IFI6P09912 130 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 RPL30P62888 115 aaKnown RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 C10orf113Q5VZT2 155 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ATG4DQ86TL0 474 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF683Q8IZ20 524 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 GPBAR1Q8TDU6 330 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms