RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ZNF770Q6IQ21 691 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 NDUFB3O43676 98 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 KLF7O75840 302 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 ORM1P02763 201 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 KLF9Q13886 244 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 RGPD5Q99666 1765 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 A6NJY4 79 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 MS4A18H0YCH9 400 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 LANCL1O43813 399 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 COX6CP09669 75 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 LBX1P52954 281 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 ZNF79Q15937 498 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 MS4A18Q3C1V0 323 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 RPS4Y2Q8TD47 263 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 SEBOXQ9HB31 216 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
SCN3B-201ENST00000299333 DMKNQ6E0U4 476 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-201ENST00000299333 NUP98P52948 1817 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF205O95201 554 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 CD27P26842 260 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.31
SCN3B-201ENST00000299333 CST9Q5W186 159 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 CALHM1Q8IU99 346 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 MRGPRDQ8TDS7 321 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 TMEM204Q9BSN7 226 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 GSN-AS1Q9NRJ2 163 aa13.15□□□□□ -0.31
SCN3B-201ENST00000299333 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.31
SCN3B-201ENST00000299333 MPZL1O95297 269 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 OR1N2Q8NGR9 330 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
SCN3B-201ENST00000299333 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ALG1L2C9J202 215 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 J3KRW8 73 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 SOCS1O15524 211 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 CXCL2P19875 107 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF117Q03924 483 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 CYB561D1Q8N8Q1 229 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 PIMREGQ9BSJ6 248 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ONECUT1Q9UBC0 465 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ANXA10Q9UJ72 324 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 SDK1Q7Z5N4 2213 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 CHD4Q14839 1912 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 MDH2P40926 338 aaKnown RBP13.14□□□□□ -0.31
SCN3B-201ENST00000299333 OR1N1Q8NGS0 311 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 SGMS2Q8NHU3 365 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 ZG16BQ96DA0 208 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 FZR1Q9UM11 496 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 PRSS12P56730 875 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 SLC35B1P78383 322 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 VN1R2Q8NFZ6 395 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 TNFSF18Q9UNG2 199 aa13.14□□□□□ -0.31
SCN3B-201ENST00000299333 PTP4A3O75365 173 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 ZGLP1P0C6A0 271 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 HOXA6P31267 233 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 WNT2BQ93097 391 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 CDC42EP2O14613 210 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 MGPP08493 103 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 HMGA2P52926 109 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 SUMO3P55854 103 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 CTAG1AP78358 180 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 OR1L1Q8NH94 360 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 EID2BQ96D98 161 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 SLC25A33Q9BSK2 321 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 LDLRAD3Q86YD5 345 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 CD300LDQ6UXZ3 194 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 GAPTQ8N292 157 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 R3HDM4Q96D70 268 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 DNAJB12Q9NXW2 375 aaKnown RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 CA1P00915 261 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-201ENST00000299333 SEC11BP0C7V7 166 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 IFITM3Q01628 133 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 MICBQ29980 383 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms