RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DHRS11Q6UWP2 260 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 SCCPDHQ8NBX0 429 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 POM121Q96HA1 1249 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 PIGMQ9H3S5 423 aa18.12■□□□□ 0.49
SOX17-201ENST00000297316 TIMM8AO60220 97 aaPredicted RBP18.11■□□□□ 0.49
SOX17-201ENST00000297316 SNAPC5O75971 98 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 GRPP07492 148 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 ZNF154Q13106 437 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 LY6DQ14210 128 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 OR8G1Q15617 311 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 OR8G5Q8NG78 346 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 TOMM40LQ969M1 308 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 PKIBQ9C010 78 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 C13orf42A0A1B0GVH6 325 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 J3QT63 122 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 MPV17LQ2QL34 196 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 IGSF11Q5DX21 431 aa18.11■□□□□ 0.49
SOX17-201ENST00000297316 CHMP1AQ9HD42 196 aaPredicted RBP18.11■□□□□ 0.49
SOX17-201ENST00000297316 C14orf166Q9Y224 244 aaKnown RBP18.11■□□□□ 0.49
SOX17-201ENST00000297316 KALRNO60229 2985 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 CDIPTO14735 213 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 FCGR2CP31995 323 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 ZNF718Q3SXZ3 478 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 FAM76BQ5HYJ3 339 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 VHLLQ6RSH7 139 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 GTF3AQ92664 365 aaKnown RBP18.1■□□□□ 0.49
SOX17-201ENST00000297316 REG4Q9BYZ8 158 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 ARL6Q9H0F7 186 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 TMEM100Q9NV29 134 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 C5orf51A6NDU8 294 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 ATP6V1G2-DDX39BF2Z307 99 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 ATXN7O15265 892 aaPredicted RBP18.1■□□□□ 0.49
SOX17-201ENST00000297316 RP2O75695 350 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 NAPSAO96009 420 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 CTSDP07339 412 aaPredicted RBP18.1■□□□□ 0.49
SOX17-201ENST00000297316 FXYD4P59646 89 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 ALKAL2Q6UX46 152 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 FAM58AQ8N1B3 248 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 CXorf58Q96LI9 332 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 MFFQ9GZY8 342 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 SDHAF2Q9NX18 166 aa18.1■□□□□ 0.49
SOX17-201ENST00000297316 TRAV24A0A0B4J272 114 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 GCH1P30793 250 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 ATXN7L3Q14CW9 347 aaPredicted RBP18.09■□□□□ 0.49
SOX17-201ENST00000297316 C11orf87Q6NUJ2 197 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 UNQ6126/PRO20091Q6UXV3 157 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 SUMF2Q8NBJ7 301 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 GALNT11Q8NCW6 608 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 DMRTA2Q96SC8 542 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 JKAMPQ9P055 326 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 DUSP13Q9UII6 198 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 LRP5LA4QPB2 252 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 CRYAAP02489 173 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 NMBP08949 121 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 RPA2P15927 270 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 KITLGP21583 273 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 RGS7BPQ6MZT1 257 aaPredicted RBP18.09■□□□□ 0.49
SOX17-201ENST00000297316 ZNF826PQ6ZT77 177 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 ZNF546Q86UE3 836 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 FAM219AQ8IW50 185 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 COQ8AQ8NI60 647 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 Q9N2K0 584 aa18.09■□□□□ 0.49
SOX17-201ENST00000297316 MED19A0JLT2 244 aaPredicted RBP18.08■□□□□ 0.48
SOX17-201ENST00000297316 POM121CA8CG34 1229 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 C16orf97H3BN30 126 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 HS3ST1O14792 307 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 MBNL2Q5VZF2 373 aaKnown RBP18.08■□□□□ 0.48
SOX17-201ENST00000297316 SPERTQ8NA61 448 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 RND1Q92730 232 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 RDH5Q92781 318 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 PRORYQ9H606 182 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 ROS1P08922 2347 aa18.08■□□□□ 0.48
SOX17-201ENST00000297316 A0A0B4J2A0 478 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 MFSD2BA6NFX1 497 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 B3GALNT1O75752 331 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 ECI1P42126 302 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 C20orf204Q6ZNR8 217 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 NEK7Q8TDX7 302 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 COMMD9Q9P000 198 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 SHPKQ9UHJ6 478 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 CRYM-AS1A6NIL9 109 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 KCNAB3O43448 404 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 SCTP09683 121 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 ZNF728P0DKX0 622 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 SLC25A4P12235 298 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 AADACP22760 399 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 FGL1Q08830 312 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 PRAMEF6Q5VXH4 476 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 GSG1LQ6UXU4 331 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 OR10C1Q96KK4 312 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 LINC00052Q96N35 136 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 VKORC1Q9BQB6 163 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 RAB18Q9NP72 206 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 MEMO1Q9Y316 297 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 PKD1L2Q7Z442 2459 aa18.07■□□□□ 0.48
SOX17-201ENST00000297316 PRSS44E7EML9 344 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 WFDC8Q8IUA0 241 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 SCARB1Q8WTV0 552 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 SYT3Q9BQG1 590 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 PLK3Q9H4B4 646 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms