RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 NOXO1Q8NFA2 376 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 OR1F12Q8NHA8 337 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 MYO18BQ8IUG5 2567 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 SBF1O95248 1867 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 GEMIN2O14893 280 aaKnown RBP11.79□□□□□ -0.52
HPS3-201ENST00000296051 MPV17LQ2QL34 196 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 PILRAQ9UKJ1 303 aa11.79□□□□□ -0.52
HPS3-201ENST00000296051 KIR2DS1A0A191URI9 304 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 MASP2O00187 686 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
HPS3-201ENST00000296051 SP1P08047 785 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 KIR2DS4P43632 304 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 RAC3P60763 192 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 KIR2DS1Q14954 304 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS3-201ENST00000296051 MCHR2Q969V1 340 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 TRBV5-5A0A0J9YX44 114 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 A0A1W2PQM1 296 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ZNHIT1O43257 154 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ERGP11308 486 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 SSTP61278 116 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ZNF774Q6NX45 483 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ZNF880Q6PDB4 577 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 S1PR3Q99500 378 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 MFNGO00587 321 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 FOXS1O43638 330 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 NTF3P20783 257 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 DHRS11Q6UWP2 260 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 MSL2Q9HCI7 577 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 CLDN34H7C241 214 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 MGAMO43451 1857 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 CA6P23280 308 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 CD200P41217 278 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 SMIM21Q3B7S5 101 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 FAHD2BQ6P2I3 314 aaPredicted RBP11.78□□□□□ -0.52
HPS3-201ENST00000296051 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
HPS3-201ENST00000296051 ZNF439Q8NDP4 499 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 FAHD2AQ96GK7 314 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 LPAR2Q9HBW0 351 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 TREM2Q9NZC2 230 aa11.78□□□□□ -0.52
HPS3-201ENST00000296051 GPM6AP51674 278 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 DLK1P80370 383 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 SRSF3P84103 164 aaKnown RBP11.77□□□□□ -0.52
HPS3-201ENST00000296051 RUNX1Q01196 453 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 PECRQ9BY49 303 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 ADAM19Q9H013 955 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 PSENENQ9NZ42 101 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 DOCK4Q8N1I0 1966 aa11.77□□□□□ -0.52
HPS3-201ENST00000296051 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 H0Y8G0 127 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 ABHD3Q8WU67 409 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 NAA60Q9H7X0 242 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 PRR19A6NJB7 356 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 MPTX1A8MV57 137 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 H3BQ15 152 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 TTRP02766 147 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
HPS3-201ENST00000296051 KLK2P20151 261 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 APCDD1LQ8NCL9 501 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 ANXA10Q9UJ72 324 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.53
HPS3-201ENST00000296051 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 SPINK4O60575 86 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 KRASP01116 189 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 CHRNA7P36544 502 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 RFESDQ8TAC1 157 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 TMEM18Q96B42 140 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 UCK1Q9HA47 277 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.53
HPS3-201ENST00000296051 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.53
HPS3-201ENST00000296051 LAMA3Q16787 3333 aa11.77□□□□□ -0.53
HPS3-201ENST00000296051 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 PRR32B1ATL7 298 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 MMP9P14780 707 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
HPS3-201ENST00000296051 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 WDR54Q9H977 334 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 A1L4Q6 167 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms