RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RGS13O14921 159 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 DEGS1O15121 323 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 RBBP9O75884 186 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 SCGNO76038 276 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 OR2H2O95918 312 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 CSF1P09603 554 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 ZNF44P15621 663 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 RAB6AP20340 208 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 COL10A1Q03692 680 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 ZNF146Q15072 292 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 NDUFA5Q16718 116 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 CLEC2AQ6UVW9 174 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 C10orf105Q8TEF2 133 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 NINJ1Q92982 152 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 TIMD4Q96H15 378 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 TM2D1Q9BX74 207 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 GHITMQ9H3K2 345 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 ZMAT3Q9HA38 289 aaKnown RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 HRASLSQ9HDD0 168 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 ZNF222Q9UK12 451 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 SH2D1BO14796 132 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 C1QBP02746 253 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 TMEM50BP56557 158 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 CD83Q01151 205 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 RNASE12Q5GAN4 147 aaKnown RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 NKAPLQ5M9Q1 402 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 FIP1L1Q6UN15 594 aaKnown RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 BPIFB2Q8N4F0 458 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 ZNRF1Q8ND25 227 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 URM1Q9BTM9 101 aaKnown RBP12.64□□□□□ -0.39
CCDC140-201ENST00000295226 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 RHOFQ9HBH0 211 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 MTFP1Q9UDX5 166 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
CCDC140-201ENST00000295226 A0A0A6YYJ9 748 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 RAB27BO00194 218 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 ATP6V1G1O75348 118 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 PEX14O75381 377 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 MDH2P40926 338 aaKnown RBP12.63□□□□□ -0.39
CCDC140-201ENST00000295226 ACTBP60709 375 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 ACTG1P63261 375 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 FAM189A2Q15884 450 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 NHLRC3Q5JS37 347 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 SPIN3Q5JUX0 258 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 Q5PR19 223 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 RAB12Q6IQ22 244 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 C6orf201Q7Z4U5 140 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 FAM89BQ8N5H3 189 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 DYRK2Q92630 601 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 MYOZ1Q9NP98 299 aaPredicted RBP12.63□□□□□ -0.39
CCDC140-201ENST00000295226 MCUBQ9NWR8 336 aa12.63□□□□□ -0.39
CCDC140-201ENST00000295226 ZNF107Q9UII5 783 aaPredicted RBP12.63□□□□□ -0.39
CCDC140-201ENST00000295226 ELF5Q9UKW6 265 aaPredicted RBP12.63□□□□□ -0.39
CCDC140-201ENST00000295226 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 CEACAM18A8MTB9 384 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 SLC33A1O00400 549 aaPredicted RBP12.62□□□□□ -0.39
CCDC140-201ENST00000295226 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 ADAM20O43506 726 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 PSPNO60542 156 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 FCN3O75636 299 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 MT-ND4P03905 459 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 PTHLHP12272 177 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 CPT2P23786 658 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 PRSS3P35030 304 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 IL13RA2Q14627 380 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 KRTAP1-3Q8IUG1 177 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 ASCC1Q8N9N2 400 aaKnown RBP12.62□□□□□ -0.39
CCDC140-201ENST00000295226 MED30Q96HR3 178 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 DMRTB1Q96MA1 342 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 FYTTD1Q96QD9 318 aaKnown RBP12.62□□□□□ -0.39
CCDC140-201ENST00000295226 PIMREGQ9BSJ6 248 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
CCDC140-201ENST00000295226 UBE2QL1A1L167 161 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 METTL21EPA6NDL7 271 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
CCDC140-201ENST00000295226 GNB3P16520 340 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 GZMKP49863 264 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 NKX2-5P52952 324 aaPredicted RBP12.61□□□□□ -0.39
CCDC140-201ENST00000295226 CDK10Q15131 360 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 SUMF2Q8NBJ7 301 aa12.61□□□□□ -0.39
CCDC140-201ENST00000295226 OR4S1Q8NGB4 309 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms