RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 GPX1P07203 203 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 SNAI3Q3KNW1 292 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 CXorf66Q5JRM2 361 aaPredicted RBP11.01□□□□□ -0.65
SLX4-201ENST00000294008 MBD3L1Q8WWY6 194 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 TREX1Q9NSU2 369 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 KCNE3Q9Y6H6 103 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
SLX4-201ENST00000294008 C16orf97H3BN30 126 aa11□□□□□ -0.65
SLX4-201ENST00000294008 DLK1P80370 383 aa11□□□□□ -0.65
SLX4-201ENST00000294008 ZG16BQ96DA0 208 aa11□□□□□ -0.65
SLX4-201ENST00000294008 ADTRPQ96IZ2 230 aa11□□□□□ -0.65
SLX4-201ENST00000294008 A0A1W2PS18 150 aa11□□□□□ -0.65
SLX4-201ENST00000294008 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
SLX4-201ENST00000294008 SF3B6Q9Y3B4 125 aaKnown RBP11□□□□□ -0.65
SLX4-201ENST00000294008 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
SLX4-201ENST00000294008 CDIPTO14735 213 aa11□□□□□ -0.65
SLX4-201ENST00000294008 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
SLX4-201ENST00000294008 SKP2Q13309 424 aa11□□□□□ -0.65
SLX4-201ENST00000294008 HIKESHIQ53FT3 197 aa11□□□□□ -0.65
SLX4-201ENST00000294008 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
SLX4-201ENST00000294008 PRR13Q9NZ81 148 aa11□□□□□ -0.65
SLX4-201ENST00000294008 A0A087WUJ7 227 aa11□□□□□ -0.65
SLX4-201ENST00000294008 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
SLX4-201ENST00000294008 SLC6A1P30531 599 aa11□□□□□ -0.65
SLX4-201ENST00000294008 IER3P46695 156 aa11□□□□□ -0.65
SLX4-201ENST00000294008 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
SLX4-201ENST00000294008 ZNF880Q6PDB4 577 aa11□□□□□ -0.65
SLX4-201ENST00000294008 SORT1Q99523 831 aa11□□□□□ -0.65
SLX4-201ENST00000294008 KNTC1P50748 2209 aa11□□□□□ -0.65
SLX4-201ENST00000294008 ISLRO14498 428 aa11□□□□□ -0.65
SLX4-201ENST00000294008 INHBBP09529 407 aa11□□□□□ -0.65
SLX4-201ENST00000294008 TM4SF4P48230 202 aa11□□□□□ -0.65
SLX4-201ENST00000294008 CCR5P51681 352 aa11□□□□□ -0.65
SLX4-201ENST00000294008 TMEM33P57088 247 aa11□□□□□ -0.65
SLX4-201ENST00000294008 EIF3IQ13347 325 aaKnown RBP11□□□□□ -0.65
SLX4-201ENST00000294008 ANKRD33Q7Z3H0 272 aa11□□□□□ -0.65
SLX4-201ENST00000294008 OR1K1Q8NGR3 316 aa11□□□□□ -0.65
SLX4-201ENST00000294008 GPR82Q96P67 336 aa11□□□□□ -0.65
SLX4-201ENST00000294008 ATOH8Q96SQ7 321 aa11□□□□□ -0.65
SLX4-201ENST00000294008 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
SLX4-201ENST00000294008 RASL12Q9NYN1 266 aa11□□□□□ -0.65
SLX4-201ENST00000294008 A0A1B0GVG6 124 aa11□□□□□ -0.65
SLX4-201ENST00000294008 HSPB2A8KAH6 182 aa11□□□□□ -0.65
SLX4-201ENST00000294008 TNFSF14O43557 240 aa11□□□□□ -0.65
SLX4-201ENST00000294008 PAGE4O60829 102 aa11□□□□□ -0.65
SLX4-201ENST00000294008 KISS1Q15726 138 aa11□□□□□ -0.65
SLX4-201ENST00000294008 HSPB2Q16082 182 aa11□□□□□ -0.65
SLX4-201ENST00000294008 HCP5Q6MZN7 132 aa11□□□□□ -0.65
SLX4-201ENST00000294008 DOK1Q99704 481 aa11□□□□□ -0.65
SLX4-201ENST00000294008 GPR27Q9NS67 375 aa11□□□□□ -0.65
SLX4-201ENST00000294008 UPK1AO00322 258 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 GABRB1P18505 474 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 LHX8Q68G74 356 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 LIAT1Q6ZQX7 453 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 ZFAND2BQ8WV99 257 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 GPA33Q99795 319 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 FCGR3AP08637 254 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 OR5AC1P0C628 307 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 YBX1P67809 324 aaKnown RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 HPXP02790 462 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 CX3CL1P78423 397 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 B9D1Q9UPM9 204 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 ZFP30Q9Y2G7 519 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 RHOXF1Q8NHV9 184 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 A0A1B0GTH9 108 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 FCMRO60667 390 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 IL9P15248 144 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 JOSD1Q15040 202 aaPredicted RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 CTF1Q16619 201 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 PMS2CLQ68D20 193 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 ANKRD37Q7Z713 158 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 HDHD3Q9BSH5 251 aaPredicted RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 C7orf71A4D174 169 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 GFRA3O60609 400 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 DDOSTP39656 456 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 CTU2Q2VPK5 515 aaKnown RBP10.99□□□□□ -0.65
SLX4-201ENST00000294008 BAP18Q8IXM2 172 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
SLX4-201ENST00000294008 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 C11orf94C9JXX5 98 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
SLX4-201ENST00000294008 TTC9CQ8N5M4 171 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 FOXJ3Q9UPW0 622 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 CKS2P33552 79 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 OR2A5Q96R48 311 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 IGHV3-49A0A0A0MS15 119 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 KHDC3LQ587J8 217 aa10.98□□□□□ -0.65
SLX4-201ENST00000294008 TSPO2Q5TGU0 170 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms