RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGFL3Q6UXB1 125 aa15.25■□□□□ 0.03
CAPN1-201ENST00000279247 LYZL2Q7Z4W2 148 aa15.25■□□□□ 0.03
CAPN1-201ENST00000279247 SAXO1Q8IYX7 474 aa15.25■□□□□ 0.03
CAPN1-201ENST00000279247 OR2S2Q9NQN1 319 aa15.25■□□□□ 0.03
CAPN1-201ENST00000279247 TMEM100Q9NV29 134 aa15.25■□□□□ 0.03
CAPN1-201ENST00000279247 CHD3Q12873 2000 aaKnown RBP15.24■□□□□ 0.03
CAPN1-201ENST00000279247 IGHV1-18A0A0C4DH31 117 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 CRYM-AS1A6NIL9 109 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 MLNRO43193 412 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 RAC2P15153 192 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 IL24Q13007 206 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 MPV17LQ2QL34 196 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 NHLRC3Q5JS37 347 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 GGNBP1Q5YKI7 109 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 ZNF474Q6S9Z5 364 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-201ENST00000279247 ACOT7LQ6ZUV0 252 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 RNF126Q9BV68 326 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 DIRAS3O95661 229 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 CLEC9AQ6UXN8 241 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 CCDC36Q8IYA8 594 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 ST8SIA2Q92186 375 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 GTF3AQ92664 365 aaKnown RBP15.24■□□□□ 0.03
CAPN1-201ENST00000279247 KIRREL1Q96J84 757 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 DMRTA2Q96SC8 542 aa15.24■□□□□ 0.03
CAPN1-201ENST00000279247 ESRP2Q9H6T0 727 aaKnown RBP15.24■□□□□ 0.03
CAPN1-201ENST00000279247 IGKV1D-13A0A0B4J2D9 117 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 FAM87AP0C7U9 286 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 IGKV1-13P0DP09 117 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 GCH1P30793 250 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 CLLU1Q5K131 121 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 SLC51BQ86UW2 128 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 ZNF565Q8N9K5 539 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 Q8NFD4 153 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 PURGQ9UJV8 347 aaKnown RBP15.23■□□□□ 0.03
CAPN1-201ENST00000279247 IGHV2OR16-5A0A0B4J2B6 119 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 OR5H1A6NKK0 313 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 OR2H2O95918 312 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 NAPSAO96009 420 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 FAM27E3Q08E93 113 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 LRP11Q86VZ4 500 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 MOB3AQ96BX8 217 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 C2orf50Q96LR7 162 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 NAA60Q9H7X0 242 aa15.23■□□□□ 0.03
CAPN1-201ENST00000279247 IGKV1-6A0A0C4DH72 117 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 CGAP01215 116 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 KCNRGQ8N5I3 272 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 OR1S1Q8NH92 325 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 NMES1Q9C002 83 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MSRB2Q9Y3D2 182 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 A0A0D9SG52 128 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 LRP5LA4QPB2 252 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MBD3L4A6NDZ8 208 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MBD3L3A6NE82 208 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MBD3L5A6NJ08 208 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 IFNA21P01568 189 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 SLC25A4P12235 298 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 CYCSP99999 105 aaKnown RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 PRR30Q53SZ7 412 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 BEND4Q6ZU67 534 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MBD3L2Q8NHZ7 208 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 MRPL30Q8TCC3 161 aaKnown RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 ASB13Q8WXK3 278 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 TP53RKQ96S44 253 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 SLC5A7Q9GZV3 580 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 RCC2Q9P258 522 aaKnown RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 TRAPPC2LQ9UL33 140 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 NXPH3O95157 252 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 SRSF4Q08170 494 aaKnown RBP15.22■□□□□ 0.03
CAPN1-201ENST00000279247 C1orf185Q5T7R7 199 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 TMEM65Q6PI78 240 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 GAPTQ8N292 157 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 PLPPR1Q8TBJ4 325 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 CCL28Q9NRJ3 127 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 RASL12Q9NYN1 266 aa15.22■□□□□ 0.03
CAPN1-201ENST00000279247 IQCF6A8MYZ5 107 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 HSPA12AO43301 675 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 OR2F2O95006 317 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 CRYABP02511 175 aaKnown RBP15.21■□□□□ 0.03
CAPN1-201ENST00000279247 ECI1P42126 302 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 OR2F1Q13607 317 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 ESCO2Q56NI9 601 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 Q6ZR03 302 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 ZNF818PQ6ZRF7 136 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 TPRX1Q8N7U7 411 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 SCARB1Q8WTV0 552 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 SMIM3Q9BZL3 60 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 RBM7Q9Y580 266 aaKnown RBP15.21■□□□□ 0.03
CAPN1-201ENST00000279247 ITPR1Q14643 2758 aa15.21■□□□□ 0.03
CAPN1-201ENST00000279247 NMBP08949 121 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 ZNF250P15622 560 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 GNRHRP30968 328 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 OR2Z1Q8NG97 314 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 LHFPL5Q8TAF8 219 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 SYT3Q9BQG1 590 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 PKIBQ9C010 78 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 PLK3Q9H4B4 646 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 OR1A1Q9P1Q5 309 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 POLDIP2Q9Y2S7 368 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 COL12A1Q99715 3063 aa15.21■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A10PA6NDY2 464 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms