RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 IL13RA2Q14627 380 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 RSU1Q15404 277 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 STX19Q8N4C7 294 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 OR4P4Q8NGL7 312 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 PLPPR1Q8TBJ4 325 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 SGCDQ92629 289 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 FOXRED1Q96CU9 486 aaPredicted RBP11.63□□□□□ -0.55
HMGN3-201ENST00000275036 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
HMGN3-201ENST00000275036 CLEC7AQ9BXN2 247 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 TAS2R3Q9NYW6 316 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 FBLN5Q9UBX5 448 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 ING4Q9UNL4 249 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 HILPDAQ9Y5L2 63 aa11.63□□□□□ -0.55
HMGN3-201ENST00000275036 A0A1W2PP11 408 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 FUOMA2VDF0 154 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 MYL12BO14950 172 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 PIN1P1O15428 100 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 CGB3P0DN86 165 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 CGB7P0DN87 165 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 CELP19835 753 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 FSTP19883 344 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 PAN3Q58A45 887 aaKnown RBP11.62□□□□□ -0.55
HMGN3-201ENST00000275036 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 ABHD12Q8N2K0 398 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 OR13A1Q8NGR1 328 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 VCXQ9H320 206 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 ZNF286AQ9HBT8 521 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 PAK1IP1Q9NWT1 392 aaPredicted RBP11.62□□□□□ -0.55
HMGN3-201ENST00000275036 IL36GQ9NZH8 169 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
HMGN3-201ENST00000275036 A6NDX4 124 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 CDK1P06493 297 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 GABRA5P31644 462 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 KIR2DS4P43632 304 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 EFNB2P52799 333 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 RBM11P57052 281 aaKnown RBP11.61□□□□□ -0.55
HMGN3-201ENST00000275036 TAS2R43P59537 309 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 NHLRC3Q5JS37 347 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 C6orf141Q5SZD1 244 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 RSBN1Q5VWQ0 802 aaPredicted RBP11.61□□□□□ -0.55
HMGN3-201ENST00000275036 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 NDNFQ8TB73 568 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 DERL3Q96Q80 235 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 ST3GAL6Q9Y274 331 aa11.61□□□□□ -0.55
HMGN3-201ENST00000275036 TRAV39A0A0B4J263 110 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
HMGN3-201ENST00000275036 M0QZ24 198 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 GEMIN2O14893 280 aaKnown RBP11.6□□□□□ -0.55
HMGN3-201ENST00000275036 TIMM23O14925 209 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 CD1AP06126 327 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 SERPINA2P20848 420 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 HTR1DP28221 377 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 CD34P28906 385 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 GLP1RP43220 463 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 DYNLT3P51808 116 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 DEFA6Q01524 100 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 BDH1Q02338 343 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 PAX5Q02548 391 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 INSL4Q14641 139 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 FBLN7Q53RD9 439 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 OR52W1Q6IF63 320 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 LIAT1Q6ZQX7 453 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 LYPD6Q86Y78 171 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 OR4C13Q8NGP0 309 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 DPCDQ9BVM2 203 aaPredicted RBP11.6□□□□□ -0.55
HMGN3-201ENST00000275036 MMP27Q9H306 513 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 RANBP3Q9H6Z4 567 aaPredicted RBP11.6□□□□□ -0.55
HMGN3-201ENST00000275036 IFT22Q9H7X7 185 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 RAB18Q9NP72 206 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 ABCB10Q9NRK6 738 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 OR6C3Q9NZP0 311 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 FOXJ3Q9UPW0 622 aa11.6□□□□□ -0.55
HMGN3-201ENST00000275036 LSM2Q9Y333 95 aaKnown RBP11.6□□□□□ -0.55
HMGN3-201ENST00000275036 MEIKINA0A087WXM9 373 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 A0A087X0M5 115 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 KBTBD11-OT1A0A1B0GTJ5 212 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 A0A1B0GX30 115 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 FAM90A22PA8MWA6 464 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 PTGES3LE9PB15 166 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 OR7C1O76099 320 aaPredicted RBP11.59□□□□□ -0.55
HMGN3-201ENST00000275036 MAS1P04201 325 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
HMGN3-201ENST00000275036 GABPB1Q06547 395 aaPredicted RBP11.59□□□□□ -0.55
HMGN3-201ENST00000275036 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
HMGN3-201ENST00000275036 SLC22A6Q4U2R8 563 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 RNLSQ5VYX0 342 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 OR4D6Q8NGJ1 314 aa11.59□□□□□ -0.55
HMGN3-201ENST00000275036 MUL1Q969V5 352 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms