RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 H7BYZ3 331 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 TNFSF10P50591 281 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 BLKP51451 505 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 UCP2P55851 309 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 C11orf42Q8N5U0 333 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
HERC6-202ENST00000273960 A0A0J9YY10 115 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 HSPB2A8KAH6 182 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 DDAH2O95865 285 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 ISG15P05161 165 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 CTSDP07339 412 aaPredicted RBP11.15□□□□□ -0.62
HERC6-202ENST00000273960 GALR1P47211 349 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 HERV-K104P61576 105 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 HSPB2Q16082 182 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 RNF133Q8WVZ7 376 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 ADGRG7Q96K78 797 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 ANXA10Q9UJ72 324 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 NCOA6Q14686 2063 aaPredicted RBP11.15□□□□□ -0.62
HERC6-202ENST00000273960 COL6A3P12111 3177 aa11.15□□□□□ -0.62
HERC6-202ENST00000273960 A0A087WWC5 75 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 MSTNO14793 375 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 IAPPP10997 89 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 DEFA4P12838 97 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 SMRP1Q8NCR6 262 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 ARV1Q9H2C2 271 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 FOXJ2Q9P0K8 574 aa11.15□□□□□ -0.63
HERC6-202ENST00000273960 A0A1B0GU03 582 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 CHST1O43916 411 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 NUPR1O60356 82 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
HERC6-202ENST00000273960 HPRT1P00492 218 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 CLRN1P58418 232 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 TLE4Q04727 773 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 FAM90A2PQ658T7 463 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 LIAT1Q6ZQX7 453 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 ZNF100Q8IYN0 542 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 RPRMQ9NS64 109 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
HERC6-202ENST00000273960 CARD18P57730 90 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 HSF1Q00613 529 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 OR2AE1Q8NHA4 323 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
HERC6-202ENST00000273960 TMEM50AO95807 157 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 TK1P04183 234 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 ZNF43P17038 809 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 SUCLG1P53597 346 aaKnown RBP11.14□□□□□ -0.63
HERC6-202ENST00000273960 MTCP1P56278 107 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 DTX1Q86Y01 620 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
HERC6-202ENST00000273960 LRRC3CA6NJW4 275 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 PIGYQ3MUY2 71 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 POC1BQ8TC44 478 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 GATAD1Q8WUU5 269 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 LRRC61Q9BV99 259 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 RBKSQ9H477 322 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 PIGLQ9Y2B2 252 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 SPTY2D1-AS1A0A0U1RR47 76 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 MS4A18H0YCH9 400 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 ZNF41P51814 821 aaPredicted RBP11.13□□□□□ -0.63
HERC6-202ENST00000273960 MS4A18Q3C1V0 323 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
HERC6-202ENST00000273960 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 KLHL13Q9P2N7 655 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 NAGKQ9UJ70 344 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 FRYLO94915 3013 aa11.13□□□□□ -0.63
HERC6-202ENST00000273960 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 ZNF17P17021 662 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 AADACP22760 399 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 ZNF92Q03936 586 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 TCF23Q7RTU1 214 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 TMPRSS7Q7RTY8 843 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 CUTCQ9NTM9 273 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 PTPRZ1P23471 2315 aaPredicted RBP11.12□□□□□ -0.63
HERC6-202ENST00000273960 OPN1MWP04001 364 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 CD38P28907 300 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 ARHGEF39Q8N4T4 335 aa11.12□□□□□ -0.63
HERC6-202ENST00000273960 RNASE8Q8TDE3 154 aaKnown RBP11.12□□□□□ -0.63
HERC6-202ENST00000273960 HOXB13Q92826 284 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms