RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNF581Q9P0T4 197 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 H0YL77 283 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 IL5P05113 134 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 DTYMKP23919 212 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 ZNF154Q13106 437 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 IL13RA2Q14627 380 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 Q6ZR03 302 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 CHST6Q9GZX3 395 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 AK3Q9UIJ7 227 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 HOXB4P17483 251 aaPredicted RBP20.68■□□□□ 0.9
SSBP4-201ENST00000270061 PDLIM4P50479 330 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 IDO2Q6ZQW0 420 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 FAM58AQ8N1B3 248 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 ZCCHC24Q8N2G6 241 aaKnown RBP20.68■□□□□ 0.9
SSBP4-201ENST00000270061 BEST4Q8NFU0 473 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 SYT3Q9BQG1 590 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 MYOZ1Q9NP98 299 aaPredicted RBP20.68■□□□□ 0.9
SSBP4-201ENST00000270061 RCC2Q9P258 522 aaKnown RBP20.68■□□□□ 0.9
SSBP4-201ENST00000270061 FZR1Q9UM11 496 aa20.68■□□□□ 0.9
SSBP4-201ENST00000270061 RHBDL1O75783 438 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 OR7C1O76099 320 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-201ENST00000270061 ERVK11-1P61568 191 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 MZT1Q08AG7 82 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 MICBQ29980 383 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 METTL11BQ5VVY1 283 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 CMSS1Q9BQ75 279 aaKnown RBP20.67■□□□□ 0.9
SSBP4-201ENST00000270061 ST6GALNAC5Q9BVH7 336 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 TLNRD1Q9H1K6 362 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 OR51J1Q9H342 316 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 DUSP13Q9UII6 198 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 JMJD1CQ15652 2540 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 IGLV3-9A0A075B6K5 115 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 M0R233 179 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 SNU13P55769 128 aaKnown RBP20.67■□□□□ 0.9
SSBP4-201ENST00000270061 TAS2R46P59540 309 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 KRTAP1-1Q07627 177 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 NEU4Q8WWR8 484 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-201ENST00000270061 ST6GAL2Q96JF0 529 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 ALX4Q9H161 411 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-201ENST00000270061 IFT22Q9H7X7 185 aa20.67■□□□□ 0.9
SSBP4-201ENST00000270061 A0A096LNT2 108 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 NDUFS8O00217 210 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 NOS1APO75052 506 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-201ENST00000270061 IFNA6P05013 189 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 PGA5P0DJD9 388 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 PRKACAP17612 351 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 AMY2BP19961 511 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 MRPS15P82914 257 aaKnown RBP20.66■□□□□ 0.9
SSBP4-201ENST00000270061 GLDNQ6ZMI3 551 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-201ENST00000270061 LRP11Q86VZ4 500 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 BATF2Q8N1L9 274 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 ARRDC1Q8N5I2 433 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 OR13C8Q8NGS7 320 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 MS4A5Q9H3V2 200 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 SPACA1Q9HBV2 294 aa20.66■□□□□ 0.9
SSBP4-201ENST00000270061 PMP2P02689 132 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 KLF3P57682 345 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-201ENST00000270061 NKPD1Q17RQ9 610 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 SLC36A1Q7Z2H8 476 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 ZNF488Q96MN9 340 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 NRIP2Q9BQI9 281 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 PIMREGQ9BSJ6 248 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 ETAA1Q9NY74 926 aa20.65■□□□□ 0.9
SSBP4-201ENST00000270061 ZNF230Q9UIE0 474 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-201ENST00000270061 GLAP06280 429 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 SELENOVP59797 346 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 LOXL1Q08397 574 aaPredicted RBP20.64■□□□□ 0.9
SSBP4-201ENST00000270061 MAB21L1Q13394 359 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 PDCD1Q15116 288 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 ATAD3CQ5T2N8 411 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 CD276Q5ZPR3 534 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 OR5AP2Q8NGF4 316 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 OR5H2Q8NGV7 314 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 MED28Q9H204 178 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 ABCA2Q9BZC7 2435 aa20.64■□□□□ 0.9
SSBP4-201ENST00000270061 CDIPTO14735 213 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 GRPP07492 148 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 DAOP14920 347 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 ANXA7P20073 488 aaKnown RBP20.64■□□□□ 0.89
SSBP4-201ENST00000270061 C11orf53Q8IXP5 236 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 HDHD3Q9BSH5 251 aaPredicted RBP20.64■□□□□ 0.89
SSBP4-201ENST00000270061 MSL2Q9HCI7 577 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 IL36RNQ9UBH0 155 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 ZNF221Q9UK13 617 aa20.64■□□□□ 0.89
SSBP4-201ENST00000270061 SNRPGP15A8MWD9 76 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 F5H5P2 479 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 CSN2P05814 226 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 FCGR3AP08637 254 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 SCGB2B2Q4G0G5 96 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 BRICD5Q6PL45 260 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 ZDHHC22Q8N966 263 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 POC1AQ8NBT0 407 aa20.63■□□□□ 0.89
SSBP4-201ENST00000270061 GPN1Q9HCN4 374 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-201ENST00000270061 ANK3Q12955 4377 aaKnown RBP20.62■□□□□ 0.89
SSBP4-201ENST00000270061 INAFM1C9JVW0 142 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 PTBP3O95758 552 aaKnown RBP20.62■□□□□ 0.89
SSBP4-201ENST00000270061 CD200P41217 278 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 OR3A3P47888 321 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 CBX3Q13185 183 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 OVCH2Q7RTZ1 564 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms