RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 HSD17B6O14756 317 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 FOLR3P41439 243 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 HIKESHIQ53FT3 197 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 CDCP2Q5VXM1 449 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 FAM210BQ96KR6 192 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 ZNF2Q9BSG1 426 aaPredicted RBP13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 RIMS4Q9H426 269 aaPredicted RBP13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 CBLN4Q9NTU7 201 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 ZNF701Q9NV72 531 aaPredicted RBP13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 KLHL13Q9P2N7 655 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 A0A087WWC5 75 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 B4E171 279 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 AMBPP02760 352 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 TSPAN7P41732 249 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 Q0VFX4 171 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 DNM1P34Q6PK57 102 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 DEGS2Q6QHC5 323 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 THNSL2Q86YJ6 484 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 UEVLDQ8IX04 471 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 R3HDM4Q96D70 268 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 ABHD14AQ9BUJ0 271 aa13.84□□□□□ -0.19
MAP1LC3B-201ENST00000268607 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IGHV3-15A0A0B4J1V0 119 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DLEU1O43261 78 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CCL3P10147 92 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ANOS1P23352 680 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GNG10P50151 68 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CLRN1P58418 232 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ABHD12BQ7Z5M8 362 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF429Q86V71 674 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 REEP6Q96HR9 211 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR10A2Q9H208 303 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GPR137BO60478 399 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GLI4P10075 376 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PIP4P1Q86T03 277 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR10S1Q8NGN2 331 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RNF138Q8WVD3 245 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FOXD3Q9UJU5 478 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 POLR1DQ9Y2S0 133 aa13.83□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 A6NNC1 897 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CDRT15L2A8MXV6 281 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DKK1O94907 266 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 HPNP05981 417 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PGA3P0DJD8 388 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 MSX1P28360 303 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 BLVRBP30043 206 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GLIPR1P48060 266 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LFNGQ8NES3 379 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 FAM71F1Q96KD3 344 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GPR87Q9BY21 358 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ACTR3CQ9C0K3 210 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PITPNC1Q9UKF7 332 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IGF2RP11717 2491 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 K7N7A8 449 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 M0R143 59 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF205O95201 554 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ONECUT2O95948 504 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 MMP7P09237 267 aaPredicted RBP13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TDGF1P3P51864 188 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 C1QL2Q7Z5L3 287 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PPP1R32Q7Z5V6 425 aa13.82□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CRYM-AS1A6NIL9 109 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RND3P61587 244 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 VASH2Q86V25 355 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IL22RA1Q8N6P7 574 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZFP62Q8NB50 900 aaPredicted RBP13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NPRL2Q8WTW4 380 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 MRPL13Q9BYD1 178 aaKnown RBP13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 WDR54Q9H977 334 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LIPGQ9Y5X9 500 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 NCOA6Q14686 2063 aaPredicted RBP13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 A0A1B0GW64 132 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF43P17038 809 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 GABREP78334 506 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 CYB561D1Q8N8Q1 229 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 IMMP1LQ96LU5 166 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 PECRQ9BY49 303 aa13.81□□□□□ -0.2
MAP1LC3B-201ENST00000268607 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TP53I11O14683 189 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TRAF3IP2O43734 574 aaPredicted RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SPINK2P20155 84 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TSPO2Q5TGU0 170 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 TMEM183AQ8IXX5 376 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 LIN37Q96GY3 246 aaPredicted RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ZNF319Q9P2F9 582 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SVILO95425 2214 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 RER1O15258 196 aa13.8□□□□□ -0.2
MAP1LC3B-201ENST00000268607 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms