RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TCTN3Q6NUS6 607 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 NEURL2Q9BR09 285 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 NRSN2Q9GZP1 204 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 MOB4Q9Y3A3 225 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 FCGR3BO75015 233 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 ATOH1Q92858 354 aaPredicted RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 MARVELD1Q9BSK0 173 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 LRRK1Q38SD2 2015 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 IGHV3-15A0A0B4J1V0 119 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 PPP1CCP36873 323 aaKnown RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 CBLN2Q8IUK8 224 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 TOX2Q96NM4 488 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 THAP10Q9P2Z0 257 aaPredicted RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 ZNF107Q9UII5 783 aaPredicted RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 TCL1AP56279 114 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 SP6Q3SY56 376 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 A0A087WUJ7 227 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 B3GALT4O96024 378 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 HINT1P49773 126 aaPredicted RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 CCR5P51681 352 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 TMEM33P57088 247 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 RAB32Q13637 225 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 DEGS2Q6QHC5 323 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 MRGPRGQ86SM5 289 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 MRGPREQ86SM8 312 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 MBNL1Q9NR56 388 aaKnown RBP10.78□□□□□ -0.68
SRRM4-201ENST00000267260 THADAQ6YHU6 1953 aa10.78□□□□□ -0.68
SRRM4-201ENST00000267260 SPRY3O43610 288 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 TWIST1Q15672 202 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 FOXB2Q5VYV0 432 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 ARHGAP5-AS1Q96IT6 56 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 RASL11BQ9BPW5 248 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.68
SRRM4-201ENST00000267260 TCTN1Q2MV58 587 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 TRILQ7L0X0 811 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 C1RLQ9NZP8 487 aa10.77□□□□□ -0.68
SRRM4-201ENST00000267260 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 RAXQ9Y2V3 346 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 PLPPR5Q32ZL2 321 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 PABPC1L2AQ5JQF8 200 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 RIMKLAQ8IXN7 391 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
SRRM4-201ENST00000267260 H3BQ15 152 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 ID1P41134 155 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 MRPL54Q6P161 138 aaKnown RBP10.77□□□□□ -0.69
SRRM4-201ENST00000267260 TMEM207Q6UWW9 146 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 A0A1B0GV90 55 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 TCRBV5S2A0A599 114 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 TRDCB7Z8K6 153 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 RBFOX2O43251 390 aaKnown RBP eCLIP10.77□□□□□ -0.69
SRRM4-201ENST00000267260 DDTP30046 118 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 GNG10P50151 68 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 KCNAB1Q14722 419 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 GBGT1Q8N5D6 347 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 NT5CQ8TCD5 201 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 FGF14Q92915 247 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 ETFBKMTQ8IXQ9 262 aa10.77□□□□□ -0.69
SRRM4-201ENST00000267260 ERRFI1Q9UJM3 462 aaPredicted RBP10.77□□□□□ -0.69
SRRM4-201ENST00000267260 LPAR6P43657 344 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 EMDP50402 254 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 QSER1Q2KHR3 1735 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 LOC389332A0A1B0GUA5 103 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 OR13H1Q8NG92 308 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 TMEM108Q6UXF1 575 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 GFRALQ6UXV0 394 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 CDC14BO60729 498 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 CTAG2O75638 210 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 ALKBH6Q3KRA9 238 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 ZNF385CQ66K41 422 aaPredicted RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 FAM219AQ8IW50 185 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 OIT3Q8WWZ8 545 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 MRPL58Q14197 206 aaKnown RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 ZNF880Q6PDB4 577 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 PLEKHB1Q9UF11 243 aaPredicted RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 TBX21Q9UL17 535 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 OR4C45A6NMZ5 311 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 CTDSPLO15194 276 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 ARF6P62330 175 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 PSG5Q15238 335 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 LGALSLQ3ZCW2 172 aaPredicted RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 MT-ND6P03923 174 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 WNT1P04628 370 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 IL4P05112 153 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 SURF2Q15527 256 aaPredicted RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 CRYGNQ8WXF5 182 aa10.76□□□□□ -0.69
SRRM4-201ENST00000267260 ZCCHC14Q8WYQ9 949 aaKnown RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
SRRM4-201ENST00000267260 KLF3P57682 345 aaPredicted RBP10.75□□□□□ -0.69
SRRM4-201ENST00000267260 PRSS8Q16651 343 aa10.75□□□□□ -0.69
SRRM4-201ENST00000267260 MPV17LQ2QL34 196 aa10.75□□□□□ -0.69
SRRM4-201ENST00000267260 C17orf99Q6UX52 265 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms