RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 LINC00470Q9BZP3 86 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 PARP12Q9H0J9 701 aaKnown RBP10.69□□□□□ -0.7
BEST3-201ENST00000266661 SH3BGRL3Q9H299 93 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 Q9N2K0 584 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 TCFL5Q9UL49 500 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 CEP295Q9C0D2 2601 aa10.69□□□□□ -0.7
BEST3-201ENST00000266661 NKX2-6A6NCS4 301 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 PRSS44E7EML9 344 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 NME2P1O60361 137 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 RPS18P62269 152 aaKnown RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 CTAG1AP78358 180 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 EWSR1Q01844 656 aaKnown RBP eCLIP10.68□□□□□ -0.7
BEST3-201ENST00000266661 RNF212Q495C1 297 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 SLC25A26Q70HW3 274 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 CLCC1Q96S66 551 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 LUZP4Q9P127 313 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 FBXO9Q9UK97 447 aaPredicted RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 CACNA1AO00555 2505 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 C1QL1O75973 258 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 IFNA4P05014 189 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 PPT1P50897 306 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 FOXC1Q12948 553 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 HERPUD1Q15011 391 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 HES3Q5TGS1 186 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 C5orf24Q7Z6I8 188 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 SELENOHQ8IZQ5 122 aaKnown RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 LILRB1Q8NHL6 650 aaPredicted RBP10.68□□□□□ -0.7
BEST3-201ENST00000266661 EXTL1Q92935 676 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 ABHD14BQ96IU4 210 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 TAAR9Q96RI9 348 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 SLC7A10Q9NS82 523 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 PARPBPQ9NWS1 579 aa10.68□□□□□ -0.7
BEST3-201ENST00000266661 IGSF23A1L1A6 192 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
BEST3-201ENST00000266661 SERPINA7P05543 415 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 BCL3P20749 454 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 FGF12P61328 243 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 HERV-K104P61576 105 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 SRPXP78539 464 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 CDCP2Q5VXM1 449 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 TIPARPQ7Z3E1 657 aaKnown RBP10.67□□□□□ -0.7
BEST3-201ENST00000266661 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 NAXEQ8NCW5 288 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 SFT2D1Q8WV19 159 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 ZNF442Q9H7R0 627 aa10.67□□□□□ -0.7
BEST3-201ENST00000266661 LOC400499M0QZD8 3231 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 COX5BP10606 129 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 AGAP20933 346 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 CAMLGP49069 296 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 ARF1P84077 181 aaKnown RBP10.66□□□□□ -0.7
BEST3-201ENST00000266661 SSPNQ14714 243 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 AWAT1Q58HT5 328 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 DPPA2Q7Z7J5 298 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 TBC1D26Q86UD7 250 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 OR56B2PQ8NGI1 322 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 IP6K3Q96PC2 410 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 SIGLEC12Q96PQ1 595 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 PRRG4Q9BZD6 226 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 CHD8Q9HCK8 2581 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 IGKV1D-13A0A0B4J2D9 117 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
BEST3-201ENST00000266661 ZNF503-AS2A6NEH8 195 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 PITX3O75364 302 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 TMEM50AO95807 157 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 SCTP09683 121 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 IGKV1-13P0DP09 117 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 UCP1P25874 307 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 OTX2P32243 289 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 MAS1LP35410 378 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 PPP1CCP36873 323 aaKnown RBP10.66□□□□□ -0.7
BEST3-201ENST00000266661 LHX2P50458 406 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 ID3Q02535 119 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 PRDX4Q13162 271 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
BEST3-201ENST00000266661 SPSB3Q6PJ21 355 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 ZNF818PQ6ZRF7 136 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 C2CD4CQ8TF44 421 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 CT55Q8WUE5 264 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 TMEM171Q8WVE6 324 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 C14orf79Q96F83 325 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 HIPK2Q9H2X6 1198 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 SPACA1Q9HBV2 294 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
BEST3-201ENST00000266661 ARID1AO14497 2285 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 DUXBA0A1W2PPF3 345 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 C5orf52A6NGY3 159 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms