RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PDCD1LG2Q9BQ51 273 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 GAL3ST2Q9H3Q3 398 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 S100A14Q9HCY8 104 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 FAM118AQ9NWS6 357 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 RPL36Q9Y3U8 105 aaKnown RBP7.8□□□□□ -1.16
VPS41-201ENST00000265745 PCDHGB5Q9Y5G0 923 aa7.8□□□□□ -1.16
VPS41-201ENST00000265745 A0A087X0M5 115 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 A0A1B0GX30 115 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 G3V4G9 280 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 H3BUI4 141 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 SLC33A1O00400 549 aaPredicted RBP7.79□□□□□ -1.16
VPS41-201ENST00000265745 CCDC159P0C7I6 412 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 CGB3P0DN86 165 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 CGB7P0DN87 165 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 GDNFP39905 211 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 IL18R1Q13478 541 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 BEAN1Q3B7T3 259 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 KLHL22Q53GT1 634 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 KRBOX4Q5JUW0 171 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 KPRPQ5T749 579 aaPredicted RBP7.79□□□□□ -1.16
VPS41-201ENST00000265745 ZNF691Q5VV52 312 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 ELP2Q6IA86 826 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 ZNF529Q6P280 563 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 OR52I1Q8NGK6 324 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 ZNF596Q8TC21 504 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 APH1BQ8WW43 257 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 OR5M11Q96RB7 305 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
VPS41-201ENST00000265745 DHDHQ9UQ10 334 aa7.79□□□□□ -1.16
VPS41-201ENST00000265745 TRAV24A0A0B4J272 114 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LEUTXA8MZ59 168 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LY6LH3BQJ8 138 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 BUB1B-PAK6H3BSN5 160 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 PEX14O75381 377 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 WBP4O75554 376 aaKnown RBP7.78□□□□□ -1.16
VPS41-201ENST00000265745 HCKP08631 526 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LIMS3P0CW19 117 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LIMS4P0CW20 117 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 CD24P25063 80 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 BRS3P32247 399 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 PTGFRP43088 359 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 MTNR1BP49286 362 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 GTF2A1P52655 376 aaPredicted RBP7.78□□□□□ -1.16
VPS41-201ENST00000265745 GBX2P52951 348 aaPredicted RBP7.78□□□□□ -1.16
VPS41-201ENST00000265745 C17orf58Q2M2W7 97 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 NSUN5P1Q3KNT7 163 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 CCDC58Q4VC31 144 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 UTF1Q5T230 341 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LPCAT4Q643R3 524 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 ASCL4Q6XD76 172 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 PQLC1Q8N2U9 271 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 ZNF565Q8N9K5 539 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 Q8NFD4 153 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 PXT1Q8NFP0 134 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 OR4D6Q8NGJ1 314 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 OR51T1Q8NGJ9 327 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 HAVCR2Q8TDQ0 301 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 STMN2Q93045 179 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 CREB3L1Q96BA8 519 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 JAM3Q9BX67 310 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 MMP28Q9H239 520 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 NCOR1P1Q9H4R4 102 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 LINC00574Q9H8X3 128 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 ZNF286AQ9HBT8 521 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 FGF20Q9NP95 211 aaPredicted RBP7.78□□□□□ -1.16
VPS41-201ENST00000265745 ING3Q9NXR8 418 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 OR6C3Q9NZP0 311 aa7.78□□□□□ -1.16
VPS41-201ENST00000265745 PRKDCP78527 4128 aaKnown RBP7.78□□□□□ -1.16
VPS41-201ENST00000265745 SHISA3A0PJX4 238 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 FAM172BPA6NC97 362 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 ZNF729A6NN14 1252 aaPredicted RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 H0YJX3 145 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 TOR1AO14656 332 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 ALDOBP05062 364 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 RAB3AP20336 220 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 VDAC2P45880 294 aaPredicted RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 SOX2P48431 317 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 PRRX1P54821 245 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 CD83Q01151 205 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 ATXN7L3Q14CW9 347 aaPredicted RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 SMN1Q16637 294 aaKnown RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 TMEM95Q3KNT9 176 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 TPTE2P1Q5T6R2 138 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 XAF1Q6GPH4 301 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 C16orf82Q7Z2V1 217 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 OR4F17Q8NGA8 305 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 OR51A2Q8NGJ7 313 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 CNIH3Q8TBE1 160 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 GPR148Q8TDV2 347 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 TSEN15Q8WW01 171 aaKnown RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 RGP1Q92546 391 aaPredicted RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 KIRREL1Q96J84 757 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 AKR1E2Q96JD6 320 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 OR4F4Q96R69 305 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms