RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 RPL23AP62750 156 aaKnown RBP14.17□□□□□ -0.14
CTCF-201ENST00000264010 ZNF528Q3MIS6 628 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 PHLDA2Q53GA4 152 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 ZIC4Q8N9L1 334 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 ZNF837Q96EG3 531 aaPredicted RBP14.17□□□□□ -0.14
CTCF-201ENST00000264010 ICE1Q9Y2F5 2266 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 IGKV1-9A0A0C4DH69 117 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 FUT3P21217 361 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 MAGEA5P43359 124 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 ZDHHC23Q8IYP9 409 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 ANXA10Q9UJ72 324 aa14.17□□□□□ -0.14
CTCF-201ENST00000264010 TMEM50BP56557 158 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PKIAP61925 76 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 RAB1AP62820 205 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 HMGN3Q15651 99 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PEAR1Q5VY43 1037 aaPredicted RBP14.16□□□□□ -0.14
CTCF-201ENST00000264010 UQCC3Q6UW78 93 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 TUSC5Q8IXB3 177 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 OR56B2PQ8NGI1 322 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 FAM103A1Q9BTL3 118 aaKnown RBP14.16□□□□□ -0.14
CTCF-201ENST00000264010 TNFSF18Q9UNG2 199 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 LAMP3Q9UQV4 416 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 FCGR2CP31995 323 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PMS2P11Q13670 270 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 GUK1Q16774 197 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 C1QL2Q7Z5L3 287 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 C1orf87Q8N0U7 546 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 BHLHE23Q8NDY6 225 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 SPIN2AQ99865 258 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 SPIN2BQ9BPZ2 258 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 NMES1Q9C002 83 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PRR13Q9NZ81 148 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PHF3Q92576 2039 aaKnown RBP14.16□□□□□ -0.14
CTCF-201ENST00000264010 PPP5D1E7EU14 171 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PDCD6O75340 191 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 ADAP1O75689 374 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 SUCLG1P53597 346 aaKnown RBP14.16□□□□□ -0.14
CTCF-201ENST00000264010 ZNF345Q14585 488 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 LGI3Q8N145 548 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 PSMF1Q92530 271 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 NABP1Q96AH0 204 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 LYZL4Q96KX0 146 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
CTCF-201ENST00000264010 PCNX3Q9H6A9 2034 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 NCOR1O75376 2440 aa14.16□□□□□ -0.14
CTCF-201ENST00000264010 LNP1A1A4G5 178 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 DKK1O94907 266 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 MPZP25189 248 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 QRFPP83859 136 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 ZNF66Q6ZN08 573 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 ZNF695Q8IW36 515 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 TMEM105Q8N8V8 129 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 IL22RA2Q969J5 263 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 MRPS18CQ9Y3D5 142 aaKnown RBP14.15□□□□□ -0.14
CTCF-201ENST00000264010 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 PQLC2LA1A4F0 135 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 CD8AP01732 235 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 PIGPP57054 158 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 CMTM1Q8IZ96 169 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 C15orf54Q8N8G6 183 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 OR13G1Q8NGZ3 307 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 ZNF596Q8TC21 504 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 BTF3L4Q96K17 158 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 PRUNE2Q8WUY3 3088 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 SULT1A1P50225 295 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 S100A7AQ86SG5 101 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 ZSCAN4Q8NAM6 433 aaPredicted RBP14.15□□□□□ -0.14
CTCF-201ENST00000264010 PHYHIPLQ96FC7 376 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
CTCF-201ENST00000264010 ZNF727A8MUV8 499 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 SIAH2O43255 324 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 SYNGR3O43761 229 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 CA11O75493 328 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 NCR3LG1Q68D85 454 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 RPUSD3Q6P087 351 aaKnown RBP14.14□□□□□ -0.15
CTCF-201ENST00000264010 ZNF611Q8N823 705 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 RTN4IP1Q8WWV3 396 aaPredicted RBP14.14□□□□□ -0.15
CTCF-201ENST00000264010 TTTY12Q9BZ98 90 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 WNT5BQ9H1J7 359 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 SLC7A10Q9NS82 523 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 IL2RAP01589 272 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 CTSDP07339 412 aaPredicted RBP14.14□□□□□ -0.15
CTCF-201ENST00000264010 DTYMKP23919 212 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 CTAG1AP78358 180 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 PARD6AQ9NPB6 346 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 AK3Q9UIJ7 227 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 LHX6Q9UPM6 363 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 SEC14L6B5MCN3 397 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 PHF1O43189 567 aaPredicted RBP14.14□□□□□ -0.15
CTCF-201ENST00000264010 EPHA1P21709 976 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 ID4P47928 161 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 SRPXP78539 464 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 ZNF92Q03936 586 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 BAGE3Q86Y29 109 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 BAGE2Q86Y30 109 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 WFIKKN1Q96NZ8 548 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 RASL12Q9NYN1 266 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 FOXJ2Q9P0K8 574 aa14.14□□□□□ -0.15
CTCF-201ENST00000264010 TRGV5A0A0B4J1U4 118 aa14.13□□□□□ -0.15
CTCF-201ENST00000264010 ZNF732B4DXR9 585 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms