RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TRDCB7Z8K6 153 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ZIC3O60481 467 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 CNOT4O95628 575 aaKnown RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 FUT3P21217 361 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 MRPS34P82930 218 aaKnown RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 MPV17LQ2QL34 196 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 OR2B11Q5JQS5 317 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 FAM27BQ5VT28 67 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 SPNS3Q6ZMD2 512 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ABHD3Q8WU67 409 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF488Q96MN9 340 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ETV2O00321 342 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 SYNGR3O43761 229 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 IGHV2-5P01817 119 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 TRGC2P03986 189 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 CFIP05156 583 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 KLK3P07288 261 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 HOXB1P14653 301 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 CTSSP25774 331 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 OTX2P32243 289 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 DSCR4P56555 118 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 H3F3AP84243 136 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 RPS19BP1Q86WX3 136 aaKnown RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 IL22RA1Q8N6P7 574 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 LINC00469Q8N7U9 141 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF383Q8NA42 475 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 PLEKHF2Q9H8W4 249 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
CHMP3-201ENST00000263856 KNTC1P50748 2209 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 A0A1W2PR80 420 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 VAMP5O95183 116 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 CCL4P13236 92 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 RBM11P57052 281 aaKnown RBP10.68□□□□□ -0.7
CHMP3-201ENST00000263856 NKX6-1P78426 367 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-201ENST00000263856 PCOLCEQ15113 449 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 CARFQ8N187 725 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 OR56B2PQ8NGI1 322 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 OR4D5Q8NGN0 318 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 TAAR9Q96RI9 348 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 SLC25A31Q9H0C2 315 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 HSF4Q9ULV5 492 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 PROB1E7EW31 1015 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-201ENST00000263856 ERVFRD-1P60508 538 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 GPR61Q9BZJ8 451 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 ARV1Q9H2C2 271 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 PRO1933Q9H354 126 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 SEBOXQ9HB31 216 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-201ENST00000263856 TMEM38BQ9NVV0 291 aa10.68□□□□□ -0.7
CHMP3-201ENST00000263856 IGLV3-32A0A0A0MS00 114 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 PLA2G5P39877 138 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 FUT6P51993 359 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 ELLP55199 621 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 RAB1AP62820 205 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 HEPN1Q6WQI6 88 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 VASH2Q86V25 355 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF610Q8N9Z0 462 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 NECAP1Q8NC96 275 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SPIN2AQ99865 258 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SPIN2BQ9BPZ2 258 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 TMEM222Q9H0R3 208 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 TRIOBPQ9H2D6 2365 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 CA11O75493 328 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 TMEM50AO95807 157 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 CRYGSP22914 178 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 PYY3Q5JQD4 70 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF100Q8IYN0 542 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SCAF4O95104 1147 aaKnown RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 RFPL3SP0C7P2 107 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 FABP4P15090 132 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 PAX6P26367 422 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 RPS16P62249 146 aaKnown RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 HLA-BQ31612 363 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SELENOHQ8IZQ5 122 aaKnown RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 OR1K1Q8NGR3 316 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 MUCL1Q96DR8 90 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 CRIM1Q9NZV1 1036 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 LRFN1Q9P244 771 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 FOXD3Q9UJU5 478 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-201ENST00000263856 HS3ST3B1Q9Y662 390 aa10.67□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF816-ZNF321PA0A0X1KG74 233 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 P04436 131 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
CHMP3-201ENST00000263856 GDF1P27539 372 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 SUCLG1P53597 346 aaKnown RBP10.66□□□□□ -0.7
CHMP3-201ENST00000263856 OR2T2Q6IF00 324 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 OR5T1Q8NG75 326 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 OR2H1Q9GZK4 316 aa10.66□□□□□ -0.7
CHMP3-201ENST00000263856 WNT5BQ9H1J7 359 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms