RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 BANF2Q9H503 90 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 SLC25A10Q9UBX3 287 aaPredicted RBP15.2■□□□□ 0.02
SDF4-201ENST00000263741 NDUFB7P17568 137 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 OR10K2Q6IF99 312 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 FIP1L1Q6UN15 594 aaKnown RBP15.2■□□□□ 0.02
SDF4-201ENST00000263741 IL17RELQ6ZVW7 336 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 TMEM104Q8NE00 496 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 H1FXQ92522 213 aaKnown RBP15.2■□□□□ 0.02
SDF4-201ENST00000263741 FYTTD1Q96QD9 318 aaKnown RBP15.2■□□□□ 0.02
SDF4-201ENST00000263741 UQCC2Q9BRT2 126 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 MARVELD1Q9BSK0 173 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 GON7Q9BXV9 100 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 DNTTIP1Q9H147 329 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 OR5V1Q9UGF6 321 aa15.2■□□□□ 0.02
SDF4-201ENST00000263741 MEX3AA1L020 520 aaKnown RBP15.19■□□□□ 0.02
SDF4-201ENST00000263741 HSPB6O14558 160 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 ZNF146Q15072 292 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 LRRC10Q5BKY1 277 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 HES5Q5TA89 166 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 THOC7Q6I9Y2 204 aaKnown RBP15.19■□□□□ 0.02
SDF4-201ENST00000263741 BTN2A1Q7KYR7 527 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 CYYR1Q96J86 154 aa15.19■□□□□ 0.02
SDF4-201ENST00000263741 TRAV1-2A0A0B4J238 106 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 TMEM82A0PJX8 343 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 OR2H2O95918 312 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 CSTBP04080 98 aaKnown RBP15.18■□□□□ 0.02
SDF4-201ENST00000263741 C1orf100Q5SVJ3 147 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 ELP2Q6IA86 826 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 LURAP1LQ8IV03 231 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 CDH26Q8IXH8 852 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 ZFAND1Q8TCF1 268 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 MED30Q96HR3 178 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 IL36GQ9NZH8 169 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 KCNS2Q9ULS6 477 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 INAFM1C9JVW0 142 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 PSPNO60542 156 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 C1QBP02746 253 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 ZNF44P15621 663 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 ELK1P19419 428 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 GABRR1P24046 479 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 HTR2CP28335 458 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 DVL1P1P54792 670 aaPredicted RBP15.18■□□□□ 0.02
SDF4-201ENST00000263741 PAX2Q02962 417 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 SPIN3Q5JUX0 258 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 DCAF12L2Q5VW00 463 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 FAHD2BQ6P2I3 314 aaPredicted RBP15.18■□□□□ 0.02
SDF4-201ENST00000263741 OSR2Q8N2R0 312 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 ZNF561Q8N587 486 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 FAHD2AQ96GK7 314 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 BEX2Q9BXY8 128 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 V9GY05 133 aa15.18■□□□□ 0.02
SDF4-201ENST00000263741 LOC105371242A0A075B767 164 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 A0A0B4J203 849 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 TRAV20A0A0B4J274 112 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 ANKRD34BA5PLL1 514 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 INMT-MINDY4F8WBC2 141 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 ZNF737O75373 536 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 CRTAPO75718 401 aaPredicted RBP15.17■□□□□ 0.02
SDF4-201ENST00000263741 ARSBP15848 533 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 RAB3BP20337 219 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 RBM11P57052 281 aaKnown RBP15.17■□□□□ 0.02
SDF4-201ENST00000263741 RRAS2P62070 204 aaPredicted RBP15.17■□□□□ 0.02
SDF4-201ENST00000263741 Q6P435 159 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 SFXN4Q6P4A7 337 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 C17orf107Q6ZR85 190 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 OR6M1Q8NGM8 313 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 SLC25A28Q96A46 364 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 UPRTQ96BW1 309 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 ST3GAL6Q9Y274 331 aa15.17■□□□□ 0.02
SDF4-201ENST00000263741 SLC17A2O00624 439 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 GEMIN2O14893 280 aaKnown RBP15.16■□□□□ 0.02
SDF4-201ENST00000263741 TK1P04183 234 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 NPY4RP50391 375 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 EDDM3AQ14507 147 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 OR4M1Q8NGD0 313 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 DACT3Q96B18 629 aaPredicted RBP15.16■□□□□ 0.02
SDF4-201ENST00000263741 FOXRED1Q96CU9 486 aaPredicted RBP15.16■□□□□ 0.02
SDF4-201ENST00000263741 PPA2Q9H2U2 334 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 SETD2Q9BYW2 2564 aaPredicted RBP15.16■□□□□ 0.02
SDF4-201ENST00000263741 IGHV2-70DA0A0C4DH43 119 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 A0A0G2JK05 382 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 A0A0G2JMP0 313 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 A0A0X1KG70 313 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 CHRM2P08172 466 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 VSIG8P0DPA2 414 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 MGMTP16455 207 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 RAB11BQ15907 218 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 TAF9Q16594 264 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 CR1LQ2VPA4 569 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 PYHIN1Q6K0P9 492 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 TPRX1Q8N7U7 411 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 SAMD12Q8N8I0 201 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 Q8NFD4 153 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 OR4S1Q8NGB4 309 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 OR4M2Q8NGB6 313 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 OR51T1Q8NGJ9 327 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 NUDT16L1Q9BRJ7 211 aaKnown RBP15.16■□□□□ 0.02
SDF4-201ENST00000263741 SELENOIQ9C0D9 397 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 RHOFQ9HBH0 211 aa15.16■□□□□ 0.02
SDF4-201ENST00000263741 NIPBLQ6KC79 2804 aaeCLIP15.16■□□□□ 0.025e-6■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms