RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MELTFP08582 738 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 HNF1AP20823 631 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 CA6P23280 308 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 PSG4Q00888 419 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 EWSR1Q01844 656 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 CCDC54Q8NEL0 328 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 MRGPRFQ96AM1 343 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 MRPL13Q9BYD1 178 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 IL36RNQ9UBH0 155 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 MIOXQ9UGB7 285 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 A0A0G2JMM0 328 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 A0A1W2PPB8 328 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 A0A1W2PRS3 328 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 KIR3DP1A8MWS1 328 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 SULT1A2P50226 295 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 FUT6P51993 359 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 UBE2NP61088 152 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 RAB1AP62820 205 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 PRDX4Q13162 271 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 OR2V1Q8NHB1 315 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 SPAARA0A1B0GVQ0 90 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 DEGS1O15121 323 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 DEDDO75618 318 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 KRASP01116 189 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 LSM6P62312 80 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF429Q86V71 674 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 AQP10Q96PS8 301 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 CDH20Q9HBT6 801 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 OSGIN2Q9Y236 505 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 NUDT19A8MXV4 375 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 H0YL77 283 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 SP9P0CG40 484 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 ECI1P42126 302 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 RAC1P63000 192 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 CST9LP1Q5W188 147 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 OR10D4PQ8NGN7 298 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 RFESDQ8TAC1 157 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 SLC39A9Q9NUM3 307 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 ENDOGQ14249 297 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF343Q6P1L6 599 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 GCNT2Q8N0V5 402 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 FAM131CQ96AQ9 280 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 PRO1933Q9H354 126 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 CFAP54Q96N23 3096 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 C9JQL5 133 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 K7ESF4 209 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 MPPED1O15442 326 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 IGHMP01871 453 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 RFPL3SP0C7P2 107 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 LIFP15018 202 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 NAAAQ02083 359 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 TLE4Q04727 773 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 MARS2Q96GW9 593 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 SH3BGRL2Q9UJC5 107 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 MT-ND4LP03901 98 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF816Q0VGE8 651 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 HMGN3Q15651 99 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 HPSE2Q8WWQ2 592 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 APH1AQ96BI3 265 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 CYTL1Q9NRR1 136 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 FZR1Q9UM11 496 aa14.04□□□□□ -0.16
PDZRN3-201ENST00000263666 NUP210Q8TEM1 1887 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 OR6C6A6NF89 314 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 PPP1R2P9O14990 202 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 RAB5AP20339 215 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 VHLLQ6RSH7 139 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 SKA3Q8IX90 412 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 OR5B12Q96R08 314 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 TP53RKQ96S44 253 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 NSUN5P2Q63ZY6 315 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 ZDHHC23Q8IYP9 409 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 HOXA1P49639 335 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 NFAM1Q8NET5 270 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 HES7Q9BYE0 225 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 CACNG5Q9UF02 275 aa14.03□□□□□ -0.16
PDZRN3-201ENST00000263666 LOC390937A0A1W2PQ73 354 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 BAXQ07812 192 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF787Q6DD87 383 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 HS3ST3B1Q9Y662 390 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 RAC2P15153 192 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 GABRA2P47869 451 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 EIF4E3Q8N5X7 224 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 GPR27Q9NS67 375 aa14.02□□□□□ -0.16
PDZRN3-201ENST00000263666 UBE2L5PA0A1B0GUS4 154 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 MMP9P14780 707 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 CLN3Q13286 438 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 SLC23A3Q6PIS1 610 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 CYB561D1Q8N8Q1 229 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 OIT3Q8WWZ8 545 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.17
PDZRN3-201ENST00000263666 RSG1Q9BU20 258 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms