RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 POLR2GP62487 172 aaKnown RBP eCLIP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 IQCJQ1A5X6 159 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 WIPI1Q5MNZ9 446 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 AKR7LQ8NHP1 331 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MMP24Q9Y5R2 645 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 G3V3Q6 166 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 CDKN2AP42771 156 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 CLDN12P56749 244 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MEF2CQ06413 473 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 DHRS2Q13268 280 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SIGIRRQ6IA17 410 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 Q6ZPB1 254 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 GDF15Q99988 308 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MRM2Q9UI43 246 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 FAM90A9PA6NNJ1 464 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF90Q03938 601 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 RIGQ13278 110 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ADIRFQ15847 76 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SPANXN5Q5MJ07 72 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM179BQ7Z7N9 219 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MRGPRGQ86SM5 289 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ST8SIA4Q92187 359 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 RBM38Q9H0Z9 239 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PUS1Q9Y606 427 aaKnown RBP eCLIP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ABCA7Q8IZY2 2146 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 IGLV3-12A0A075B6K2 115 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 A0A0U1RQS6 177 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SIRPB1O00241 398 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 DSCR9P59020 149 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SLC38A11Q08AI6 406 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 NSUN5P2Q63ZY6 315 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TEX261Q6UWH6 196 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SLC16A12Q6ZSM3 486 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZPLD1Q8TCW7 415 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 C8orf44Q96CB5 159 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PLA2G12AQ9BZM1 189 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 M0QZK8 103 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 H1FOOQ8IZA3 346 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MARCH1Q8TCQ1 289 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PATE1Q8WXA2 126 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MARVELD3Q96A59 401 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM165Q9HC07 324 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF705FA8MVS1 300 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF705DP0CH99 300 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF705BP0CI00 300 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF343Q6P1L6 599 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR10A7Q8NGE5 316 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR5B3Q8NH48 314 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SNX22Q96L94 193 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 LRRC3BQ96PB8 259 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 P2RX4Q99571 388 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PRR14Q9BWN1 585 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MAGT1Q9H0U3 335 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR51B6Q9H340 312 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OCEL1Q9H607 264 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PARP11Q9NR21 331 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PPP1R3CQ9UQK1 317 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 B9A039 149 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR7C2O60412 319 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MPC2O95563 127 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PAX6P26367 422 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MAS1LP35410 378 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 RDH5Q92781 318 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 FBLN5Q9UBX5 448 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 FBXL17Q9UF56 701 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TRBV9A0A0B4J1U6 114 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 IGHV3-20A0A0C4DH32 117 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR2T8A6NH00 312 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF785A8K8V0 405 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 GREM1O60565 184 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 IL18BPO95998 194 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 HLA-DQB1P01920 261 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 CTLA4P16410 223 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 COL9A1P20849 921 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 RXFP4Q8TDU9 374 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 DOK4Q8TEW6 326 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM171Q8WVE6 324 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MRPL24Q96A35 216 aaKnown RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 CHODLQ9H9P2 273 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 MEIS3P1A6NDR6 274 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 OR13C7P0DN81 318 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 GNG4P50150 75 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TNFSF10P50591 281 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 SLC25A47Q6Q0C1 308 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 NEU4Q8WWR8 484 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-202ENST00000261517 PLAC1Q9HBJ0 212 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 TNFRSF12AQ9NP84 129 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 WSB1Q9Y6I7 421 aa3.79□□□□□ -1.8
VPS13C-202ENST00000261517 K7ESF4 209 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FOXS1O43638 330 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ICMTO60725 284 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CTRB1P17538 263 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FCARP24071 287 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 STPG1Q5TH74 334 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CTRB2Q6GPI1 263 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 HSD17B11Q8NBQ5 300 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RAB24Q969Q5 203 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms