RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZNF660Q6AZW8 331 aaPredicted RBP7.77□□□□□ -1.16
CKAP2-201ENST00000258607 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 SLC25A42Q86VD7 318 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 ZNRF1Q8ND25 227 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 PRSS33Q8NF86 280 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 DNTTIP1Q9H147 329 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 ZNRD1Q9P1U0 126 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 TRAV17A0A0B4J275 112 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 TRGV8A0A0C4DH27 118 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 A0A0U1RQV5 110 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 FIGNL2A6NMB9 653 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 CDRT15L2A8MXV6 281 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 PDCD6O75340 191 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 NAT2P11245 290 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 SSTR5P35346 364 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 ALDH3B1P43353 468 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 OR3A1P47881 315 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 RBM11P57052 281 aaKnown RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 RUNX1Q01196 453 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 PEAR1Q5VY43 1037 aaPredicted RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 OR8G2PQ6IF36 304 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 CRIP3Q6Q6R5 217 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 LHFPL2Q6ZUX7 228 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 VKORC1L1Q8N0U8 176 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 SUMF2Q8NBJ7 301 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 OR5T1Q8NG75 326 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 IER2Q9BTL4 223 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 NECAP2Q9NVZ3 263 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 KIF25Q9UIL4 384 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 TP53TG5Q9Y2B4 290 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 MEMO1Q9Y316 297 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 KCNMB2Q9Y691 235 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 NKX2-6A6NCS4 301 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 SNRPGP15A8MWD9 76 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 K7EPK0 472 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 PPP1CCP36873 323 aaKnown RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 TAS2R46P59540 309 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 TMEM267Q0VDI3 215 aaPredicted RBP7.77□□□□□ -1.17
CKAP2-201ENST00000258607 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 FAM58AQ8N1B3 248 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 FAM71E2Q8N5Q1 922 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 ASCL3Q9NQ33 180 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 NAV2Q8IVL1 2488 aa7.77□□□□□ -1.17
CKAP2-201ENST00000258607 A0A1B0GW55 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 HSPB2A8KAH6 182 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 ADAM20O43506 726 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 LY6HO94772 140 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 IL2RAP01589 272 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SERPINE2P07093 398 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L2P0CJ85 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L3P0CJ86 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L4P0CJ87 422 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L5P0CJ88 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L6P0CJ89 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L7P0CJ90 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 PRF1P14222 555 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 CHATP28329 748 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 MPGP29372 298 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 IL2RGP31785 369 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 GNG10P50151 68 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 P2RX3P56373 397 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 HSPB2Q16082 182 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SHEQ5VZ18 495 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4L9Q6RFH8 374 aaPredicted RBP7.76□□□□□ -1.17
CKAP2-201ENST00000258607 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 OR2W3Q7Z3T1 314 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 HOGA1Q86XE5 327 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SLC35G3Q8N808 338 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 KLF14Q8TD94 323 aaPredicted RBP7.76□□□□□ -1.17
CKAP2-201ENST00000258607 ERGIC1Q969X5 290 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 POM121L2Q96KW2 1035 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DUX4Q9UBX2 424 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 GPR132Q9UNW8 380 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 LOC390937A0A1W2PQ73 354 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 RGS13O14921 159 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 PPYP01298 95 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 CRHP06850 196 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 NMBP08949 121 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 CECR9P0C854 216 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 COL8A2P25067 703 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 PPT1P50897 306 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 GNMTQ14749 295 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 AANATQ16613 207 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 Q6ZPA2 131 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SCCPDHQ8NBX0 429 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 MDS2Q8NDY4 140 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 OR52L2PQ8NGH6 319 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SPSB1Q96BD6 273 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 S100PBPQ96BU1 408 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 GPR137Q96N19 417 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 LRFN3Q9BTN0 628 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SPRY4Q9C004 299 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 SH3BGRL3Q9H299 93 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 DLL3Q9NYJ7 618 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 PCDHB10Q9UN67 800 aa7.76□□□□□ -1.17
CKAP2-201ENST00000258607 V9GYS6 101 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms