RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PAX5Q02548 391 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 ACSF3Q4G176 576 aaPredicted RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 THNSL2Q86YJ6 484 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 SELENOHQ8IZQ5 122 aaKnown RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 CARFQ8N187 725 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 MRGPRX4Q96LA9 322 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 NAT8Q9UHE5 227 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 IGHV5-51A0A0C4DH38 117 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 TLX3O43711 291 aaPredicted RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 IFNA1P01562 189 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 CRYABP02511 175 aaKnown RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 VDAC1P21796 283 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 ZNF41P51814 821 aaPredicted RBP9.95□□□□□ -0.82
TROAP-201ENST00000257909 EFNA3P52797 238 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 ZNF154Q13106 437 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 TMEM240Q5SV17 173 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 NCR3LG1Q68D85 454 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 CYB5R2Q6BCY4 276 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 MRGPRGQ86SM5 289 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 WDR5BQ86VZ2 330 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 OXGR1Q96P68 337 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 SIGLEC12Q96PQ1 595 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 OR5B12Q96R08 314 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 AGMATQ9BSE5 352 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 ZNF665Q9H7R5 613 aa9.95□□□□□ -0.82
TROAP-201ENST00000257909 KNL1Q8NG31 2342 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 ANGPTL7O43827 346 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 EFNA2O43921 213 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 TMEM50AO95807 157 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 MBP02144 154 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 MSR1P21757 451 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 BLKP51451 505 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 FBXW4P57775 412 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 NMSQ5H8A3 153 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 SLC25A53Q5H9E4 307 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 TBC1D26Q86UD7 250 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 GPR173Q9NS66 373 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 LAMP3Q9UQV4 416 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 SHANK1Q9Y566 2161 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 NCOA6Q14686 2063 aaPredicted RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 MARCH11A6NNE9 402 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 M0QZK8 103 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 SPRY1O43609 319 aaPredicted RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 CHST1O43916 411 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 GGCTO75223 188 aaKnown RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 EDN3P14138 238 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 ZNF25P17030 456 aaPredicted RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 FASLGP48023 281 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 NPBWR2P48146 333 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 TDGF1P3P51864 188 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 CNN3Q15417 329 aaKnown RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 NKAIN1Q4KMZ8 207 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
TROAP-201ENST00000257909 TMEM211Q6ICI0 200 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 ASCL4Q6XD76 172 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 BADQ92934 168 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 RPRMQ9NS64 109 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 SEC16AO15027 2179 aa9.94□□□□□ -0.82
TROAP-201ENST00000257909 LILRA5A6NI73 299 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 SHISA8B8ZZ34 492 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 FBLP22087 321 aaKnown RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 GNRHRP30968 328 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 OTX1P32242 354 aaPredicted RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 IDH3GP51553 393 aaPredicted RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 GFERP55789 205 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 P2RY6Q15077 328 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 C1orf194Q5T5A4 169 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 C16orf82Q7Z2V1 217 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 MRPL52Q86TS9 123 aaKnown RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 MRPL41Q8IXM3 137 aaKnown RBP9.93□□□□□ -0.82
TROAP-201ENST00000257909 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 SCGB1C1Q8TD33 95 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 DYRK2Q92630 601 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 Q9N2K0 584 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 ZNF581Q9P0T4 197 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 MYOTQ9UBF9 498 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 M0R135 149 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 OR4A8P0C604 315 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 THEGLP0DJG4 465 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 FGF5P12034 268 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 MSX1P28360 303 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 GALR1P47211 349 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 RAC1P63000 192 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 MALLQ13021 153 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 ADIRFQ15847 76 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 LCN15Q6UWW0 184 aa9.93□□□□□ -0.82
TROAP-201ENST00000257909 LHFPL2Q6ZUX7 228 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms