RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 NIPSNAP3BQ9BS92 247 aa11.54□□□□□ -0.56
H3F3B-201ENST00000254810 OPA3Q9H6K4 179 aa11.54□□□□□ -0.56
H3F3B-201ENST00000254810 ZNF442Q9H7R0 627 aa11.54□□□□□ -0.56
H3F3B-201ENST00000254810 UBE2J1Q9Y385 318 aaPredicted RBP11.54□□□□□ -0.56
H3F3B-201ENST00000254810 TMEM56-RWDD3S4R434 201 aa11.54□□□□□ -0.56
H3F3B-201ENST00000254810 TNFSF11O14788 317 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 PHOX2AO14813 284 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 CHST1O43916 411 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 F10P00742 488 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 SCTP09683 121 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 RPL23AP62750 156 aaKnown RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 EXT1Q16394 746 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 IZUMO4Q1ZYL8 232 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 FAM27BQ5VT28 67 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 FAM90A2PQ658T7 463 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 CARFQ8N187 725 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 MEGF10Q96KG7 1140 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 SMOC1Q9H4F8 434 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 A0A0G2JRQ6 117 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 SCRG1O75711 98 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 B4GALT1P15291 398 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 FUT3P21217 361 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
H3F3B-201ENST00000254810 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 RAET1LQ5VY80 246 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 OR8G5Q8NG78 346 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 PROK2Q9HC23 129 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 CRIM1Q9NZV1 1036 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
H3F3B-201ENST00000254810 A0A0J9YW62 118 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 PPP1R2P9O14990 202 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 ZIC3O60481 467 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 CCL3P10147 92 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 TCN2P20062 427 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 LHFPL2Q6ZUX7 228 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 RABEPKQ7Z6M1 372 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 DPPA2Q7Z7J5 298 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 MAML2Q8IZL2 1156 aaPredicted RBP11.52□□□□□ -0.56
H3F3B-201ENST00000254810 OR1F12Q8NHA8 337 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 S100PBPQ96BU1 408 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 TAAR3PQ9P1P4 343 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 GNG13Q9P2W3 67 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 TCFL5Q9UL49 500 aa11.52□□□□□ -0.56
H3F3B-201ENST00000254810 LOC102723971A0A1B0GUV8 181 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 PGA5P0DJD9 388 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF32P17041 273 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 VAMP2P63027 116 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 HLA-DRB3P79483 266 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 ID3Q02535 119 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 MALLQ13021 153 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 RAB35Q15286 201 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 MPV17LQ2QL34 196 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF385CQ66K41 422 aaPredicted RBP11.52□□□□□ -0.57
H3F3B-201ENST00000254810 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
H3F3B-201ENST00000254810 PIGCQ92535 297 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 CPNE4Q96A23 557 aaPredicted RBP11.52□□□□□ -0.57
H3F3B-201ENST00000254810 UNKLQ9H9P5 680 aaKnown RBP11.52□□□□□ -0.57
H3F3B-201ENST00000254810 CRLF2Q9HC73 371 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 RNF115Q9Y4L5 304 aa11.52□□□□□ -0.57
H3F3B-201ENST00000254810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 BTBD17A6NE02 478 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 HSPB6O14558 160 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 SPINK2P20155 84 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 RAB11AP62491 216 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
H3F3B-201ENST00000254810 MRPS34P82930 218 aaKnown RBP11.51□□□□□ -0.57
H3F3B-201ENST00000254810 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 IL22RA1Q8N6P7 574 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 FAM210BQ96KR6 192 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 ALKBH3Q96Q83 286 aaPredicted RBP11.51□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF665Q9H7R5 613 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 GFOD1Q9NXC2 390 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF407Q9C0G0 2248 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 hCG_38984A0A1B0GV85 526 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 HLA-HP01893 362 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 CD200P41217 278 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
H3F3B-201ENST00000254810 TMEM267Q0VDI3 215 aaPredicted RBP11.51□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 PLCXD3Q63HM9 321 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 TMEM211Q6ICI0 200 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 SLC25A26Q70HW3 274 aa11.51□□□□□ -0.57
H3F3B-201ENST00000254810 SLC35E3Q7Z769 313 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms