RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TRBV11-1A0A0K0K1C0 115 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 C3orf85A0A1B0GTC6 90 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 AQP7P3A6NL99 342 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 H3BML4 177 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SOCS1O15524 211 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 HOXA6P31267 233 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MDH2P40926 338 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RPS27P42677 84 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 GLIPR1P48060 266 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FAM3BP58499 235 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RAB11AP62491 216 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SLC25A45Q8N413 288 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PSMG3Q9BT73 122 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PLSCR2Q9NRY7 297 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 LHX6Q9UPM6 363 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 AMDHD2Q9Y303 409 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF732B4DXR9 585 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TERTO14746 1132 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 NRASP01111 189 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OTX1P32242 354 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MAS1LP35410 378 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR3A4PP47883 348 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 GFERP55789 205 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 C1orf61Q13536 156 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ANKRD55Q3KP44 614 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SLC25A47Q6Q0C1 308 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 WDR74Q6RFH5 385 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FADS6Q8N9I5 356 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 AKR7LQ8NHP1 331 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CMBLQ96DG6 245 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ADAT3Q96EY9 351 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FOXN4Q96NZ1 517 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ARV1Q9H2C2 271 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CISD1Q9NZ45 108 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 IL36GQ9NZH8 169 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PDE4DIPQ5VU43 2346 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 IGHV1OR21-1A0A087WYE8 117 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A0A087X0M5 115 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 LOC102723996A0A087X1L8 192 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1B0GX30 115 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A1L4Q6 167 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 LMO7DNF2Z398 122 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TUBG1P23258 451 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 HOXA4Q00056 320 aaPredicted RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM241Q24JQ0 296 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 C4orf17Q53FE4 359 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM41BQ5BJD5 291 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 C1QL3Q5VWW1 255 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MRPL21Q7Z2W9 205 aaKnown RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 SAXO1Q8IYX7 474 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TCTEX1D1Q8N7M0 179 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 OR1L3Q8NH93 324 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 PSMF1Q92530 271 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MOB3AQ96BX8 217 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 GGACTQ9BVM4 153 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 SPRY4Q9C004 299 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 CHODLQ9H9P2 273 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 CDH20Q9HBT6 801 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 LYRM2Q9NU23 88 aaPredicted RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 CFAP47Q6ZTR5 3102 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TRAV1-1A0A0B4J248 108 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 hCG_1809904A0A1W2PP81 198 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1W2PPE2 198 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1W2PR64 198 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1W2PRV1 198 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 ANKRD30BLA7E2S9 258 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 FAM90A26D6RGX4 464 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 OR8U8P0C7N1 319 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 COX5AP20674 150 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 HAAOP46952 286 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 FOXF1Q12946 379 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 SMAD2Q15796 467 aaKnown RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 OR2A2Q6IF42 318 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 ZBTB34Q8NCN2 500 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 UHRF2Q96PU4 802 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 C20orf24Q9BUV8 137 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MDFIC2A0A1B0GVS7 189 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 FAM90A27PA6NNH2 459 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 GEMIN2O14893 280 aaKnown RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 CST2P09228 141 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 RPS2P15880 293 aaKnown RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 PNLIPP16233 465 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 THBS3P49746 956 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 UNC119Q13432 240 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 NCOA6Q14686 2063 aaPredicted RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 PHLDA2Q53GA4 152 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 FAM69BQ5VUD6 431 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 RAET1LQ5VY80 246 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MRPL14Q6P1L8 145 aaKnown RBP3.61□□□□□ -1.83
UBE4A-201ENST00000252108 VHLLQ6RSH7 139 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 FAM219AQ8IW50 185 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 LYPD6BQ8NI32 183 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 OR10C1Q96KK4 312 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 GPR87Q9BY21 358 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 SLC2A9Q9NRM0 540 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MYOTQ9UBF9 498 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 TIMM9Q9Y5J7 89 aa3.61□□□□□ -1.83
UBE4A-201ENST00000252108 MMP24Q9Y5R2 645 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms