RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TAF9Q16594 264 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 RSPO4Q2I0M5 234 aaPredicted RBP14.66□□□□□ -0.06
FOXA1-201ENST00000250448 RSPO1Q2MKA7 263 aaPredicted RBP14.66□□□□□ -0.06
FOXA1-201ENST00000250448 LIAT1Q6ZQX7 453 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 DMRTC2Q8IXT2 367 aaPredicted RBP14.66□□□□□ -0.06
FOXA1-201ENST00000250448 TCTEX1D2Q8WW35 142 aa14.66□□□□□ -0.06
FOXA1-201ENST00000250448 M0R135 149 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 TXNL1O43396 289 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ANGPTL7O43827 346 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 DUSP1P28562 367 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 MTCP1P56278 107 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 SRYQ05066 204 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 PHLDA2Q53GA4 152 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 C10orf128Q5T292 105 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ADAM5Q6NVV9 412 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 FBXW12Q6X9E4 464 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 LRRC18Q8N456 261 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 CCDC54Q8NEL0 328 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 NABP1Q96AH0 204 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF799Q96GE5 643 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 FAM173AQ9BQD7 235 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF581Q9P0T4 197 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 HSF4Q9ULV5 492 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 BOKQ9UMX3 212 aaPredicted RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 AP4M1O00189 453 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 DBHP09172 617 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 OTX1P32242 354 aaPredicted RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 PPP1CCP36873 323 aaKnown RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 OR2B8PP59922 312 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 RSU1Q15404 277 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 LFNGQ8NES3 379 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 OR52M1Q8NGK5 317 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 OR5L1Q8NGL2 311 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 CA5BP1Q8WTZ4 195 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 MARS2Q96GW9 593 aaKnown RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ZNF385AQ96PM9 386 aaKnown RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 MIOXQ9UGB7 285 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 RCL1Q9Y2P8 373 aaKnown RBP14.65□□□□□ -0.06
FOXA1-201ENST00000250448 ACACAQ13085 2346 aa14.65□□□□□ -0.06
FOXA1-201ENST00000250448 MED19A0JLT2 244 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 PROB1E7EW31 1015 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 CXCL13O43927 109 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 OR13C7P0DN81 318 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 CHATP28329 748 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 CLDN15P56746 228 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 RAB1AP62820 205 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 HIST1H3AP68431 136 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 ARG2P78540 354 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 CLN3Q13286 438 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 CLINT1Q14677 625 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 DEFB109BQ30KR1 87 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 AARDQ4LEZ3 155 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 HIST2H3PS2Q5TEC6 136 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 TMEM182Q6ZP80 229 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 FOXL2NBQ6ZUU3 175 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 HIST2H3AQ71DI3 136 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 GGNQ86UU5 652 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 FDCSPQ8NFU4 85 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 FAM213BQ8TBF2 198 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 POM121Q96HA1 1249 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 TTTY12Q9BZ98 90 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF552Q9H707 407 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 SLC2A9Q9NRM0 540 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 MAP1BP46821 2468 aaKnown RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 A0A1B0GV50 99 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 ST8SIA3O43173 380 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 SPRY1O43609 319 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 S100PP25815 95 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 EIF2S3P41091 472 aaKnown RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 PLGLB1Q02325 96 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 NHLH2Q02577 135 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 LGI3Q8N145 548 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 TMEM54Q969K7 222 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 REEP6Q96HR9 211 aa14.64□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF845Q96IR2 970 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF703Q9H7S9 590 aaPredicted RBP14.64□□□□□ -0.07
FOXA1-201ENST00000250448 K7N7A8 449 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 SP1P08047 785 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 G0S2P27469 103 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 H3F3AP84243 136 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 SNAI3Q3KNW1 292 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.63□□□□□ -0.07
FOXA1-201ENST00000250448 DYRK2Q92630 601 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 SPSB1Q96BD6 273 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 MSI2Q96DH6 328 aaKnown RBP14.63□□□□□ -0.07
FOXA1-201ENST00000250448 ATMQ13315 3056 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 A0A1B0GW64 132 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 GLI4P10075 376 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 MEOX1P50221 254 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 NHLH1Q02575 133 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 PLEK2Q9NYT0 353 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 ANKRD11Q6UB99 2663 aaPredicted RBP14.63□□□□□ -0.07
FOXA1-201ENST00000250448 RPS23P62266 143 aaKnown RBP14.63□□□□□ -0.07
FOXA1-201ENST00000250448 PMP22Q01453 160 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 SLC22A25Q6T423 547 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 C20orf196Q8IYI0 205 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 TMEM251Q8N6I4 163 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 MDS2Q8NDY4 140 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 SPTSSAQ969W0 71 aa14.63□□□□□ -0.07
FOXA1-201ENST00000250448 KIAA1549Q9HCM3 1950 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms