RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RPS16P62249 146 aaKnown RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 RAB11AP62491 216 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 PPA1Q15181 289 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 WIPI1Q5MNZ9 446 aaPredicted RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 IL34Q6ZMJ4 242 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 TMEM105Q8N8V8 129 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 UBALD1Q8TB05 177 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 PRRX2Q99811 253 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 OR2H1Q9GZK4 316 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 SMOC1Q9H4F8 434 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 ZNF442Q9H7R0 627 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 SLC2A9Q9NRM0 540 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 IL36RNQ9UBH0 155 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 NSG1A0A0A6YYJ2 146 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 RBMXL2O75526 392 aaKnown RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 CNOT4O95628 575 aaKnown RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 MT-ND4LP03901 98 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 LCATP04180 440 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 LMO1P25800 156 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 GNMTQ14749 295 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 CEACAM16Q2WEN9 425 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 OR2T2Q6IF00 324 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 OR10D3Q8NH80 312 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 NAT6Q93015 286 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 C18orf12Q96KH6 178 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 SCGB3A2Q96PL1 93 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 GAR1Q9NY12 217 aaKnown RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 UBE2J1Q9Y385 318 aaPredicted RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 KPTNQ9Y664 436 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 MMP9P14780 707 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 RAB5CP51148 216 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 SLC22A25Q6T423 547 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 LCN15Q6UWW0 184 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 TIPARPQ7Z3E1 657 aaKnown RBP8.71□□□□□ -1.01
COPB1-201ENST00000249923 TP53RKQ96S44 253 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 PBDC1Q9BVG4 233 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 METTL9Q9H1A3 318 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 ARV1Q9H2C2 271 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 GPR179Q6PRD1 2367 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 NCOR1O75376 2440 aa8.71□□□□□ -1.01
COPB1-201ENST00000249923 AP4M1O00189 453 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 NRASP01111 189 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 HTR5AP47898 357 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 IDH3GP51553 393 aaPredicted RBP8.71□□□□□ -1.02
COPB1-201ENST00000249923 DVL1P1P54792 670 aaPredicted RBP8.71□□□□□ -1.02
COPB1-201ENST00000249923 FOXO1Q12778 655 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 OR8B8Q15620 311 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 FAM189A2Q15884 450 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 RNF212Q495C1 297 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 C9orf135Q5VTT2 229 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 DMBX1Q8NFW5 382 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
COPB1-201ENST00000249923 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
COPB1-201ENST00000249923 GALNT14Q96FL9 552 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 SF3B5Q9BWJ5 86 aaKnown RBP8.71□□□□□ -1.02
COPB1-201ENST00000249923 OR51B6Q9H340 312 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 NAA60Q9H7X0 242 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 LRFN1Q9P244 771 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 COLCA2A8K830 154 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 H0YL77 283 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 CST4P01036 141 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 CELA3AP09093 270 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 NR2C1P13056 603 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 CCL2P13500 99 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 RBP2P50120 134 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 GFRA1P56159 465 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 CARD18P57730 90 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 HERV-K104P61576 105 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 TESK1Q15569 626 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 PSMF1Q92530 271 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 SNX22Q96L94 193 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 LURAP1Q96LR2 239 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 FOXB1Q99853 325 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 GGACTQ9BVM4 153 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 C11orf1Q9H5F2 150 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 GAB2Q9UQC2 676 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 ST3GAL6Q9Y274 331 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 LIPGQ9Y5X9 500 aa8.71□□□□□ -1.02
COPB1-201ENST00000249923 FAM24AA6NFZ4 105 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 DTYMKP23919 212 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 SRD5A2P31213 254 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 RUNX1Q01196 453 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 OR14L1PQ8NHC6 308 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 TCEAL7Q9BRU2 100 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 GPR35Q9HC97 309 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 OR7C1O76099 320 aaPredicted RBP8.7□□□□□ -1.02
COPB1-201ENST00000249923 OSR2Q8N2R0 312 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 ATG101Q9BSB4 218 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 ABHD14AQ9BUJ0 271 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 UFSP2Q9NUQ7 469 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 NECAP2Q9NVZ3 263 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 CACFD1Q9UGQ2 172 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms