RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 C7orf77A4D0Y5 90 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 ANKRD30BLA7E2S9 258 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 TMEM164Q5U3C3 297 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 GGNQ86UU5 652 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 APH1AQ96BI3 265 aa10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
RAB3IP-201ENST00000247833 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 MSTNO14793 375 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 APLNRP35414 380 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 Q0VFX4 171 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 OR2T2Q6IF00 324 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 IL22RA1Q8N6P7 574 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 RRP8O43159 456 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 SYNGR1O43759 233 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 TLE1Q04724 770 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 MOB3AQ96BX8 217 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 DEFB127Q9H1M4 99 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 OR14J1Q9UGF5 321 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 RPS10P46783 165 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 P2RY1P47900 373 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF266Q14584 549 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 BTNL8Q6UX41 500 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 PPP1R3CQ9UQK1 317 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
RAB3IP-201ENST00000247833 SIRPB1O00241 398 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 YKT6O15498 198 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 IAPPP10997 89 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 CA6P23280 308 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 TIPARPQ7Z3E1 657 aaKnown RBP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 TUBD1Q9UJT1 453 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 MMP24Q9Y5R2 645 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 MED13Q9UHV7 2174 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 LRRC3CA6NJW4 275 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 WDR1O75083 606 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 EIF3GO75821 320 aaKnown RBP eCLIP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 IGLV3-1P01715 115 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 SERPINA7P05543 415 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 HIST1H3AP68431 136 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 HIST2H3PS2Q5TEC6 136 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 GPR157Q5UAW9 335 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 HIST2H3AQ71DI3 136 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 SLC16A13Q7RTY0 426 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 TMEM105Q8N8V8 129 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 CDX2Q99626 313 aaPredicted RBP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 RARRES2Q99969 163 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 SLC25A31Q9H0C2 315 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 ERRFI1Q9UJM3 462 aaPredicted RBP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 CA11O75493 328 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 IGHEP01854 428 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 ATP6V0CP27449 155 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 B3GALT5-AS1P59052 145 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF154Q13106 437 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 IL15RAQ13261 267 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 EIF2S3LQ2VIR3 472 aaKnown RBP10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 NANPQ8TBE9 248 aa10.86□□□□□ -0.67
RAB3IP-201ENST00000247833 WDFY3Q8IZQ1 3526 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 IFNA5P01569 189 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 LYL1P12980 280 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 DYNLT3P51808 116 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 OR1C1Q15619 314 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 HIKESHIQ53FT3 197 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 STX12Q86Y82 276 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 SIGLEC12Q96PQ1 595 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 COL4A2P08572 1712 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 H7C1Q1 480 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 CHST1O43916 411 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 SEC11BP0C7V7 166 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 RAB2AP61019 212 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 TMEM211Q6ICI0 200 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 THNSL2Q86YJ6 484 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 ARRDC1-AS1Q9H2J1 176 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 COL6A3P12111 3177 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 KIR2DS1A0A191URI9 304 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 ZNF724A8MTY0 619 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 NQO2P16083 231 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 PTAFRP25105 342 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 SNCAP37840 140 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 KIR2DS4P43632 304 aa10.85□□□□□ -0.67
RAB3IP-201ENST00000247833 SRPXP78539 464 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms