RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DPPA3Q6W0C5 159 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 C6orf201Q7Z4U5 140 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 RBMXL3Q8N7X1 1067 aaKnown RBP17.73■□□□□ 0.43
SNX3-201ENST00000230085 CCDC71LQ8N9Z2 235 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 SPACA9Q96E40 222 aaPredicted RBP17.73■□□□□ 0.43
SNX3-201ENST00000230085 RSRP1Q9BUV0 290 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 GGACTQ9BVM4 153 aa17.73■□□□□ 0.43
SNX3-201ENST00000230085 NCOA6Q14686 2063 aaPredicted RBP17.73■□□□□ 0.43
SNX3-201ENST00000230085 KMT2BQ9UMN6 2715 aaPredicted RBP17.72■□□□□ 0.43
SNX3-201ENST00000230085 TNFSF10P50591 281 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 ENDOGQ14249 297 aaKnown RBP17.72■□□□□ 0.43
SNX3-201ENST00000230085 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.72■□□□□ 0.43
SNX3-201ENST00000230085 FADS6Q8N9I5 356 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 OR2M3Q8NG83 312 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 PIGQQ9BRB3 760 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 METTL9Q9H1A3 318 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 SLC2A9Q9NRM0 540 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 PLSCR2Q9NRY7 297 aa17.72■□□□□ 0.43
SNX3-201ENST00000230085 A0A1W2PPE2 198 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 SFTPDP35247 375 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 H3F3AP84243 136 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 RSPO1Q2MKA7 263 aaPredicted RBP17.71■□□□□ 0.43
SNX3-201ENST00000230085 ABCA11PQ4W5N1 156 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 FBXW12Q6X9E4 464 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 ZNF600Q6ZNG1 722 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 SUMF2Q8NBJ7 301 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 OR10G3Q8NGC4 313 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 PAPOLGQ9BWT3 736 aaKnown RBP17.71■□□□□ 0.43
SNX3-201ENST00000230085 PARPBPQ9NWS1 579 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 DUXBA0A1W2PPF3 345 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 CLEC18AA5D8T8 446 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 ZNF732B4DXR9 585 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 PRH1P02810 166 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 HSPB1P04792 205 aaKnown RBP17.71■□□□□ 0.43
SNX3-201ENST00000230085 TMEM225BP0DP42 221 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 SPSB3Q6PJ21 355 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 Q6ZS49 121 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 FBXL14Q8N1E6 418 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 CLEC18CQ8NCF0 446 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 MDS2Q8NDY4 140 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 NABP1Q96AH0 204 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 HES7Q9BYE0 225 aa17.71■□□□□ 0.43
SNX3-201ENST00000230085 TLN1Q9Y490 2541 aaKnown RBP17.7■□□□□ 0.42
SNX3-201ENST00000230085 RBFOX3A6NFN3 312 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 TGOLN2O43493 480 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 FAHP16930 419 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX3-201ENST00000230085 SRSF7Q16629 238 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX3-201ENST00000230085 AKIRIN2Q53H80 203 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 GALNTL5Q7Z4T8 443 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 LYZL2Q7Z4W2 148 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 OR5D18Q8NGL1 313 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 INTS12Q96CB8 462 aaKnown RBP17.7■□□□□ 0.42
SNX3-201ENST00000230085 AK3Q9UIJ7 227 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 PIGLQ9Y2B2 252 aa17.7■□□□□ 0.42
SNX3-201ENST00000230085 RCL1Q9Y2P8 373 aaKnown RBP17.7■□□□□ 0.42
SNX3-201ENST00000230085 CHCHD2Q9Y6H1 151 aaPredicted RBP17.7■□□□□ 0.42
SNX3-201ENST00000230085 C2orf72A6NCS6 295 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ZNF814B7Z6K7 855 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 TXNL1O43396 289 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ARG1P05089 322 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 SFTPCP11686 197 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 DAOP14920 347 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 CSNK1A1P48729 337 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 FHITP49789 147 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 GNMTQ14749 295 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ZNF506Q5JVG8 444 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 TMEM42Q69YG0 159 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 SLC35E3Q7Z769 313 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ZNF100Q8IYN0 542 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 SGCZQ96LD1 299 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 BCL2L14Q9BZR8 327 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 KLRF1Q9NZS2 232 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ZNF391Q9UJN7 358 aa17.69■□□□□ 0.42
SNX3-201ENST00000230085 ELOA3CA0A087WX78 387 aaPredicted RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 A0A087WZY1 265 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 TRAV1-1A0A0B4J248 108 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 C5orf63A6NC05 138 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 B4DEV8 164 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 VAMP5O95183 116 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SCGB1D2O95969 90 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SRP19P09132 144 aaKnown RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 CCL3P10147 92 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 PPP1CCP36873 323 aaKnown RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 RND3P61587 244 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 CNN3Q15417 329 aaKnown RBP17.68■□□□□ 0.42
SNX3-201ENST00000230085 Q6ZS92 163 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 OR2C3Q8N628 320 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 CD300LFQ8TDQ1 290 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 TMEM56Q96MV1 263 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SPIN2AQ99865 258 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SPIN2BQ9BPZ2 258 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SH3BGRL3Q9H299 93 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SH2D2AQ9NP31 389 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 FBXO7Q9Y3I1 522 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 TMEM56-RWDD3S4R434 201 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 IGSF10Q6WRI0 2623 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 SEC14L6B5MCN3 397 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 HSD17B6O14756 317 aa17.68■□□□□ 0.42
SNX3-201ENST00000230085 GUCA1AP43080 201 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms