RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SEM1Q6ZVN7 128 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 SCCPDHQ8NBX0 429 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 CCDC120Q96HB5 630 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 SYT3Q9BQG1 590 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 DNTTIP1Q9H147 329 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 GSKIPQ9P0R6 139 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 DEDDO75618 318 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 IFNA21P01568 189 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 IGLV1-44P01699 117 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 HKR1P10072 659 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 FAM185AQ8N0U4 392 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 GAPTQ8N292 157 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 CCDC71LQ8N9Z2 235 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 NRIP2Q9BQI9 281 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 TMEM100Q9NV29 134 aa16.27■□□□□ 0.2
YBX3-201ENST00000228251 PRR14LQ5THK1 2151 aa16.27■□□□□ 0.19
YBX3-201ENST00000228251 MBD3L4A6NDZ8 208 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 MBD3L3A6NE82 208 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 MBD3L5A6NJ08 208 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 MPPED1O15442 326 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 ACAA1P09110 424 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 CTXN2P0C2S0 81 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 PGA5P0DJD9 388 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 TPT1P13693 172 aaKnown RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 Q6ZS92 163 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 LYZL2Q7Z4W2 148 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 BAP18Q8IXM2 172 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 ZADH2Q8N4Q0 377 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 OR1J1Q8NGS3 322 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 MBD3L2Q8NHZ7 208 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 LRRC20Q8TCA0 184 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 LINC00052Q96N35 136 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 TP53RKQ96S44 253 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 ADAT1Q9BUB4 502 aaKnown RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 IGKV1D-13A0A0B4J2D9 117 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 C1QTNF9BB2RNN3 333 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 HSPB6O14558 160 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 TK1P04183 234 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 IGKV1-13P0DP09 117 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 MPV17P39210 176 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 ZNF154Q13106 437 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 SHEQ5VZ18 495 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 Q8IYB0 196 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 LGI3Q8N145 548 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 KLF14Q8TD94 323 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 STARD4Q96DR4 205 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 CABLES2Q9BTV7 478 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 ZNF71Q9NQZ8 489 aaPredicted RBP16.26■□□□□ 0.19
YBX3-201ENST00000228251 TREM2Q9NZC2 230 aa16.26■□□□□ 0.19
YBX3-201ENST00000228251 SLC34A2O95436 690 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 SELEP16581 610 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 S100A10P60903 97 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 OR5T2Q8NGG2 359 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 USB1Q9BQ65 265 aaKnown RBP16.25■□□□□ 0.19
YBX3-201ENST00000228251 NARFLQ9H6Q4 476 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 AMDHD2Q9Y303 409 aa16.25■□□□□ 0.19
YBX3-201ENST00000228251 NPIPB11E5RHQ5 1161 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 WDR1O75083 606 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 AGFG2O95081 481 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 DIRAS3O95661 229 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 CRYZL1O95825 349 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 MBPP02686 304 aaPredicted RBP16.24■□□□□ 0.19
YBX3-201ENST00000228251 NUP62P37198 522 aaPredicted RBP16.24■□□□□ 0.19
YBX3-201ENST00000228251 ZNF146Q15072 292 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 NEK7Q8TDX7 302 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 RDH5Q92781 318 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 TMEM56Q96MV1 263 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 TMEM222Q9H0R3 208 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 HES4Q9HCC6 221 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 NUP50Q9UKX7 468 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 POLDIP2Q9Y2S7 368 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 TMEM56-RWDD3S4R434 201 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 GVINP1Q7Z2Y8 2422 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 ARID1AO14497 2285 aa16.24■□□□□ 0.19
YBX3-201ENST00000228251 C3orf85A0A1B0GTC6 90 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 TMEM210A6NLX4 147 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 TEX46H3BTG2 121 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 HS3ST1O14792 307 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 BET1O15155 118 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 MLNRO43193 412 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 TUBG1P23258 451 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 EIF2S3P41091 472 aaKnown RBP16.23■□□□□ 0.19
YBX3-201ENST00000228251 HLA-DRB3P79483 266 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 ZNF324BQ6AW86 544 aaPredicted RBP16.23■□□□□ 0.19
YBX3-201ENST00000228251 ZNF818PQ6ZRF7 136 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 CXorf67Q86X51 503 aaPredicted RBP16.23■□□□□ 0.19
YBX3-201ENST00000228251 ZNF610Q8N9Z0 462 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 OR4A4PQ8NGN8 299 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 OBP2BQ9NPH6 170 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 TUBG2Q9NRH3 451 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 PCDHB10Q9UN67 800 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 TMED3Q9Y3Q3 217 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 DSPP15924 2871 aaKnown RBP16.23■□□□□ 0.19
YBX3-201ENST00000228251 ZFHX2Q9C0A1 2572 aaPredicted RBP16.23■□□□□ 0.19
YBX3-201ENST00000228251 A0A1B0GWJ7 208 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 H0YL77 283 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 K7EPK0 472 aa16.23■□□□□ 0.19
YBX3-201ENST00000228251 SLC33A1O00400 549 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms