RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CRIM1Q9NZV1 1036 aa18.83■□□□□ 0.6
SMARCD2-201ENST00000225742 PRELID1Q9Y255 219 aa18.83■□□□□ 0.6
SMARCD2-201ENST00000225742 TECTAO75443 2155 aa18.82■□□□□ 0.6
SMARCD2-201ENST00000225742 NUFIP2Q7Z417 695 aaKnown RBP18.82■□□□□ 0.6
SMARCD2-201ENST00000225742 IL22RA2Q969J5 263 aa18.82■□□□□ 0.6
SMARCD2-201ENST00000225742 ZDHHC8Q9ULC8 765 aa18.82■□□□□ 0.6
SMARCD2-201ENST00000225742 CLEC18AA5D8T8 446 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 NGFP01138 241 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 SFTA3P0C7M3 94 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 MMP9P14780 707 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 CD46P15529 392 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 GNG3P63215 75 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 IL24Q13007 206 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 MEX3BQ6ZN04 569 aaKnown RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 SELENOHQ8IZQ5 122 aaKnown RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 ZFP62Q8NB50 900 aaPredicted RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 CLEC18CQ8NCF0 446 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 OR1K1Q8NGR3 316 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 SNIP1Q8TAD8 396 aaKnown RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 IFT22Q9H7X7 185 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 CNTRLQ7Z7A1 2325 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 J3QW42 95 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 SLC34A2O95436 690 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 TSPAN15O95858 294 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 SCTP09683 121 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 NEK7Q8TDX7 302 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 BCL2L2Q92843 193 aaPredicted RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 BSCL2Q96G97 398 aaPredicted RBP18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 KIRREL1Q96J84 757 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 KPTNQ9Y664 436 aa18.81■□□□□ 0.6
SMARCD2-201ENST00000225742 NKX2-6A6NCS4 301 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 SLC22A20A6NK97 555 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 PRKACAP17612 351 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 UCP1P25874 307 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 NKX2-1P43699 371 aaPredicted RBP18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 PEA15Q15121 130 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 HFEQ30201 348 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 SPIN3Q5JUX0 258 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 BATF2Q8N1L9 274 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 SECTM1Q8WVN6 248 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 BOD1Q96IK1 185 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 USB1Q9BQ65 265 aaKnown RBP18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 SLC25A31Q9H0C2 315 aa18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 ZNF552Q9H707 407 aaPredicted RBP18.8■□□□□ 0.6
SMARCD2-201ENST00000225742 FAM157AC9JC47 383 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 M0R296 226 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 SYNGR1O43759 233 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 GLI4P10075 376 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 S100GP29377 79 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 NPBWR1P48145 328 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 CLN3Q13286 438 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 ZNF880Q6PDB4 577 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 CMTM1Q8IZ96 169 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 OR2C3Q8N628 320 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 KDF1Q8NAX2 398 aaPredicted RBP18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 SUMF2Q8NBJ7 301 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 HS3ST6Q96QI5 342 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 CD80P33681 288 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 EWSR1Q01844 656 aaKnown RBP eCLIP18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 HERPUD1Q15011 391 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 FBXW9Q5XUX1 488 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 ZNF818PQ6ZRF7 136 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 GAPTQ8N292 157 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 OR5D13Q8NGL4 314 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 MRPL30Q8TCC3 161 aaKnown RBP18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 CACFD1Q9UGQ2 172 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 IL17BQ9UHF5 180 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 PRELID3BQ9Y3B1 194 aa18.79■□□□□ 0.6
SMARCD2-201ENST00000225742 WDR87Q6ZQQ6 2873 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 H0Y980 276 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 CDX4O14627 284 aaPredicted RBP18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 WNT2P09544 360 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 OR8U9P0C7N5 309 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 SNCAP37840 140 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 WNT5AP41221 380 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 CAMLGP49069 296 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 ZNF266Q14584 549 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 TMEM88Q6PEY1 159 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 FAM58AQ8N1B3 248 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 OR8U1Q8NH10 309 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 PLEKHF2Q9H8W4 249 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 PRSS50Q9UI38 385 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 LHX6Q9UPM6 363 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 ZNF175Q9Y473 711 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 SHANK1Q9Y566 2161 aa18.78■□□□□ 0.6
SMARCD2-201ENST00000225742 PITX3O75364 302 aa18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 VDAC1P21796 283 aa18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 WDYHV1Q96HA8 205 aa18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 ADAT1Q9BUB4 502 aaKnown RBP18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 C19orf12Q9NSK7 152 aa18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 ARHGAP21Q5T5U3 1957 aa18.77■□□□□ 0.6
SMARCD2-201ENST00000225742 TNFSF15O95150 251 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 IL18BPO95998 194 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 VCANP13611 3396 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 MDH2P40926 338 aaKnown RBP18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 NHLH2Q02577 135 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 TSC22D1Q15714 1073 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 FREM1Q5H8C1 2179 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 CBLN2Q8IUK8 224 aa18.77■□□□□ 0.59
SMARCD2-201ENST00000225742 LFNGQ8NES3 379 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms