RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 ARG1P05089 322 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 CLDN18P56856 261 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 PACRGQ96M98 296 aaPredicted RBP13.14□□□□□ -0.31
UBR5-201ENST00000220959 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 M0R296 226 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 APELAP0DMC3 54 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 SSX1Q16384 188 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
UBR5-201ENST00000220959 MUC15Q8N387 334 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 PRF1P14222 555 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
UBR5-201ENST00000220959 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
UBR5-201ENST00000220959 MAP6Q96JE9 813 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
UBR5-201ENST00000220959 MDC1Q14676 2089 aaKnown RBP13.13□□□□□ -0.31
UBR5-201ENST00000220959 GZMHP20718 246 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBR5-201ENST00000220959 MTFP1Q9UDX5 166 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 LOXL3P58215 753 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 C10orf113Q5VZT2 155 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 C12orf73Q69YU5 71 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 OR1L6Q8NGR2 347 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 Q9N2K0 584 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CTAG2O75638 210 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CARFQ8N187 725 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 TSPAN32Q96QS1 320 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 DNAJB12Q9NXW2 375 aaKnown RBP13.13□□□□□ -0.31
UBR5-201ENST00000220959 CCL21O00585 134 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 PWWP2BQ6NUJ5 590 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 A0A1B0GUL6 1792 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 TCL1AP56279 114 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 C3AR1Q16581 482 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CLN8Q9UBY8 286 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CD82P27701 267 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 CLLU1Q5K131 121 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 LPAR3Q9UBY5 353 aa13.13□□□□□ -0.31
UBR5-201ENST00000220959 B2MP61769 119 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 EBLN2Q6P2I7 272 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 NUDT16L1Q9BRJ7 211 aaKnown RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 C16orf82Q7Z2V1 217 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 SMPD2O60906 423 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 MBPP02686 304 aaPredicted RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 ZP3P21754 424 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 EPHA8P29322 1005 aaPredicted RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 CCDC144NLQ6NUI1 221 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 LINC01465Q8N7H1 131 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 MPZL1O95297 269 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 P2RX4Q99571 388 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 STARD10Q9Y365 291 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 SCAND1P57086 179 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 NTMQ9P121 344 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 YBX1P67809 324 aaKnown RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 FAM222BQ8WU58 562 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 AP4M1O00189 453 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 MRM1Q6IN84 353 aaKnown RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 GALP22466 123 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 SUCLG1P53597 346 aaKnown RBP13.12□□□□□ -0.31
UBR5-201ENST00000220959 PRNDQ9UKY0 176 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
UBR5-201ENST00000220959 MPC2O95563 127 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 COX6B1P14854 86 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 VDAC1P21796 283 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
UBR5-201ENST00000220959 SLC35B1P78383 322 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 MUC20Q8N307 709 aaPredicted RBP13.11□□□□□ -0.31
UBR5-201ENST00000220959 NUP37Q8NFH4 326 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 FBXL17Q9UF56 701 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
UBR5-201ENST00000220959 ZFPL1O95159 310 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
UBR5-201ENST00000220959 SPICQ8N5J4 248 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 LPAR5Q9H1C0 372 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 EXOGQ9Y2C4 368 aaKnown RBP13.11□□□□□ -0.31
UBR5-201ENST00000220959 RBFOX3A6NFN3 312 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 NKG7Q16617 165 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
UBR5-201ENST00000220959 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms