RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 S100A9P06702 114 aaKnown RBP11.43□□□□□ -0.58
SRP54-201ENST00000216774 CTXN2P0C2S0 81 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 BCL3P20749 454 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 UCP1P25874 307 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 KIR2DS4P43632 304 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 VAMP2P63027 116 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 KIR2DS1Q14954 304 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 MPV17LQ2QL34 196 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ZNF818PQ6ZRF7 136 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 PPP1R32Q7Z5V6 425 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ABHD3Q8WU67 409 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
SRP54-201ENST00000216774 IER2Q9BTL4 223 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 TNRC6BQ9UPQ9 1833 aaKnown RBP11.43□□□□□ -0.58
SRP54-201ENST00000216774 IGKV3D-15A0A087WSY6 115 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 RBFOX3A6NFN3 312 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ZNF724A8MTY0 619 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ZNF732B4DXR9 585 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ADAM20O43506 726 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 OR13C7P0DN81 318 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 DAOP14920 347 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 VDAC1P21796 283 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 ASCL1P50553 236 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 GFRA1P56159 465 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 HIKESHIQ53FT3 197 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 GAPTQ8N292 157 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 OR56B2PQ8NGI1 322 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 LINC00470Q9BZP3 86 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 HIPK2Q9H2X6 1198 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
SRP54-201ENST00000216774 SHANK1Q9Y566 2161 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 PIGBOS1A0A0B4J2F0 54 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 A0A1W2PR64 198 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 SLC22A20A6NK97 555 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 PROB1E7EW31 1015 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 IGHV2-5P01817 119 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 ID3Q02535 119 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 Q0VFX4 171 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 PRDX4Q13162 271 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 CEACAM21Q3KPI0 293 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 ACER2Q5QJU3 275 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 C1QL4Q86Z23 238 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 FAM24BQ8N5W8 94 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 LILRB1Q8NHL6 650 aaPredicted RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 HLA-CQ95604 372 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 SLAMF9Q96A28 289 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 KIAA1456Q9P272 454 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 GPR37O15354 613 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 MRPL33O75394 65 aaKnown RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 GDF1P27539 372 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 TGIF1Q15583 401 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 CXorf66Q5JRM2 361 aaPredicted RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 SPSB3Q6PJ21 355 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 CMTM1Q8IZ96 169 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 OR5D13Q8NGL4 314 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 OR5C1Q8NGR4 320 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 RARRES2Q99969 163 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 ZNF251Q9BRH9 671 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 RIMS4Q9H426 269 aaPredicted RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 GLRX2Q9NS18 164 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 DEPPQ9NTK1 212 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 NOSIPQ9Y314 301 aaKnown RBP11.42□□□□□ -0.58
SRP54-201ENST00000216774 ATP23Q9Y6H3 246 aa11.42□□□□□ -0.58
SRP54-201ENST00000216774 MED19A0JLT2 244 aaPredicted RBP11.41□□□□□ -0.58
SRP54-201ENST00000216774 H0Y980 276 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 ARG1P05089 322 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 SCTP09683 121 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 COX5BP10606 129 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 CEACAM1P13688 526 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 OMGP23515 440 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 HAAOP46952 286 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 CYB561P49447 251 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 OR8G1Q15617 311 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
SRP54-201ENST00000216774 DPPA3Q6W0C5 159 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 MKXQ8IYA7 352 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 ZDHHC23Q8IYP9 409 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 ZFP62Q8NB50 900 aaPredicted RBP11.41□□□□□ -0.58
SRP54-201ENST00000216774 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 NCKAP5O14513 1909 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
SRP54-201ENST00000216774 IGKV1D-13A0A0B4J2D9 117 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 A0A1B0GV50 99 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 B4E171 279 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 ZNF806P0C7X5 589 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms