RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SCGB1C2P0DMR2 95 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 CCL3P10147 92 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 FGF8P55075 233 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-201ENST00000215793 PRSS12P56730 875 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-201ENST00000215793 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR2M3Q8NG83 312 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-201ENST00000215793 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 B4DEV8 164 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 IL9P15248 144 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 TGIF2LXQ8IUE1 241 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 PTX4Q96A99 478 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 SMOC1Q9H4F8 434 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 NHSL1Q5SYE7 1610 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-201ENST00000215793 VSIG8P0DPA2 414 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR8B3Q8NGG8 313 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR8B2Q96RD0 313 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 NRTNQ99748 197 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 HEXA-AS1Q9H8Q6 139 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 LIFP15018 202 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 SULT1A1P50225 295 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR10G8Q8NGN5 311 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 LIPGQ9Y5X9 500 aa11.91□□□□□ -0.5
SF3A1-201ENST00000215793 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 MED19A0JLT2 244 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-201ENST00000215793 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 SPINT1O43278 529 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 EML2O95834 649 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 CAMPP49913 170 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 GAMTQ14353 236 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 TGIF2LYQ8IUE0 185 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 ZNF665Q9H7R5 613 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-201ENST00000215793 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 VAX2Q9UIW0 290 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 IGHV5-10-1A0A0J9YXX1 117 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 GNG7O60262 68 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 NUDT16L1Q9BRJ7 211 aaKnown RBP11.9□□□□□ -0.5
SF3A1-201ENST00000215793 C11orf94C9JXX5 98 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 BCL3P20749 454 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-201ENST00000215793 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 SSX8Q7RTT4 187 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 A0A1B0GU03 582 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 CXCL3P19876 107 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 SIGLEC14Q08ET2 396 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 DPF1Q92782 380 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 PRSS50Q9UI38 385 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
SF3A1-201ENST00000215793 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
SF3A1-201ENST00000215793 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 FOXS1O43638 330 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 TMEM97Q5BJF2 176 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 TMEM91Q6ZNR0 172 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 C9orf40Q8IXQ3 194 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 OR4C5Q8NGB2 326 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 BMPR1BO00238 502 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 PLA2G10O15496 165 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 CD1AP06126 327 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 CRISP2P16562 243 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 C10orf111Q8N326 155 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 BVESQ8NE79 360 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 MRPL24Q96A35 216 aaKnown RBP11.89□□□□□ -0.51
SF3A1-201ENST00000215793 UCN2Q96RP3 112 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 PCM1Q15154 2024 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 ACP1P24666 158 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 GZMMP51124 257 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 AWAT1Q58HT5 328 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 DCAF10Q5QP82 559 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 C1orf174Q8IYL3 243 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 PERPQ96FX8 193 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 ALX4Q9H161 411 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-201ENST00000215793 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
SF3A1-201ENST00000215793 ELOA3CA0A087WX78 387 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-201ENST00000215793 M0R296 226 aa11.88□□□□□ -0.51
SF3A1-201ENST00000215793 AP4M1O00189 453 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms