RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 Q6ZN92 141 aa11.96□□□□□ -0.49
TGFBR3-201ENST00000212355 STARD10Q9Y365 291 aa11.96□□□□□ -0.49
TGFBR3-201ENST00000212355 A0A1W2PP11 408 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 PLA2G10O15496 165 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 S100A8P05109 93 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 UBE2L3P68036 154 aaKnown RBP11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 LRRC3BQ96PB8 259 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 ARID1AO14497 2285 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 IGHV3-72A0A0B4J1Y9 119 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 DNPH1O43598 174 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 PAGE4O60829 102 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 CTSBP07858 339 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 SPP1P10451 314 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 ACAA2P42765 397 aaKnown RBP11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 NANOS3P60323 173 aaKnown RBP11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF770Q6IQ21 691 aaPredicted RBP11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC23A3Q6PIS1 610 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC36A1Q7Z2H8 476 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 LRP5O75197 1615 aa11.96□□□□□ -0.5
TGFBR3-201ENST00000212355 SH2D7A6NKC9 451 aaPredicted RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF141Q15928 474 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 DCAF12L2Q5VW00 463 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 MYOZ1Q9NP98 299 aaPredicted RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ZFP64Q9NPA5 681 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 LHX9Q9NQ69 397 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 POLR2AP24928 1970 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 H3BVH4 76 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 OR13G1Q8NGZ3 307 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 IFT22Q9H7X7 185 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 C17orf51A8MQB3 221 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC6A1P30531 599 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 TRIP6Q15654 476 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM91Q6ZNR0 172 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 OR8A1Q8NGG7 326 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 RCC2Q9P258 522 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 MYO16Q9Y6X6 1858 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 RUNX1Q01196 453 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 SSBP1Q04837 148 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 SULT1A2P50226 295 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 IFITM3Q01628 133 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 SSPNQ14714 243 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 OR2D3Q8NGH3 330 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ASB5Q8WWX0 329 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
TGFBR3-201ENST00000212355 LIPT2A6NK58 231 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 ZIC3O60481 467 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 SULT1A1P50225 295 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 RNPS1Q15287 305 aaKnown RBP11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 LRRC75AQ8NAA5 344 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 SPAARA0A1B0GVQ0 90 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 FGF2P09038 288 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM97Q5BJF2 176 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 WFIKKN1Q96NZ8 548 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM208Q9BTX3 173 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 TRDCB7Z8K6 153 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 NHLRC2Q8NBF2 726 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 IGHV5-10-1A0A0J9YXX1 117 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 CLDN34H7C241 214 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 HRASP01112 189 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 TNFRSF1AP19438 455 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 IER3P46695 156 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 DPPA3Q6W0C5 159 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 SPICQ8N5J4 248 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 CXXC4Q9H2H0 198 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 ANXA10Q9UJ72 324 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 OR4C46A6NHA9 309 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 PLAUP00749 431 aa11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 AKIRIN1Q9H9L7 192 aaPredicted RBP11.94□□□□□ -0.5
TGFBR3-201ENST00000212355 RGS13O14921 159 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 ORM1P02763 201 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 PPP1CCP36873 323 aaKnown RBP11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 ZNF841Q6ZN19 808 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 WDR61Q9GZS3 305 aaKnown RBP11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 CCL27Q9Y4X3 112 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 NXPH1P58417 271 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 NEU3Q9UQ49 428 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 HMGA2P52926 109 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 BVESQ8NE79 360 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC52A3Q9NQ40 469 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 FBLL1A6NHQ2 334 aaKnown RBP11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 PRSS1P07477 247 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 CD1BP29016 333 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC25A40Q8TBP6 338 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 CRYBA1P05813 215 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 FAM157CP0CG43 387 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms