RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HES3Q5TGS1 186 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 NUFIP2Q7Z417 695 aaKnown RBP11.31□□□□□ -0.6
CTNS-201ENST00000046640 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
CTNS-201ENST00000046640 C10orf35Q96D05 121 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
CTNS-201ENST00000046640 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 PARP11Q9NR21 331 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 B4GALT7Q9UBV7 327 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTNS-201ENST00000046640 NBEAQ8NFP9 2946 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 A0A1W2PR80 420 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 SYNGR4O95473 234 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 S100A9P06702 114 aaKnown RBP11.3□□□□□ -0.6
CTNS-201ENST00000046640 ZNF728P0DKX0 622 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 HAAOP46952 286 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 RIPPLY2Q5TAB7 128 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 Q6ZPA2 131 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.3□□□□□ -0.6
CTNS-201ENST00000046640 FAM213BQ8TBF2 198 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 TINAGQ9UJW2 476 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 UMAD1C9J7I0 102 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 Q6ZSR3 168 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 RARRES2Q99969 163 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 BCL2L14Q9BZR8 327 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 FAM212BQ9NTI7 297 aaPredicted RBP11.3□□□□□ -0.6
CTNS-201ENST00000046640 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 CRYM-AS1A6NIL9 109 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 PHF1O43189 567 aaPredicted RBP11.3□□□□□ -0.6
CTNS-201ENST00000046640 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
CTNS-201ENST00000046640 SNCAP37840 140 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 MEOX1P50221 254 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 FUT6P51993 359 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 RAB1AP62820 205 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 FBXW12Q6X9E4 464 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 ZNF100Q8IYN0 542 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 ABHD14AQ9BUJ0 271 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 PRSS50Q9UI38 385 aa11.3□□□□□ -0.6
CTNS-201ENST00000046640 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 ARGFXA6NJG6 315 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 ATXN7O15265 892 aaPredicted RBP11.29□□□□□ -0.6
CTNS-201ENST00000046640 LILRA1O75019 489 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 HEXAP06865 529 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 BCL3P20749 454 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 NCMAPQ5T1S8 102 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 FGF23Q9GZV9 251 aaPredicted RBP11.29□□□□□ -0.6
CTNS-201ENST00000046640 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 BCO1Q9HAY6 547 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 PARPBPQ9NWS1 579 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 PRR14LQ5THK1 2151 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
CTNS-201ENST00000046640 MALLQ13021 153 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 MCEMP1Q8IX19 187 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 APH1AQ96BI3 265 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 NECAP2Q9NVZ3 263 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 ABI3Q9P2A4 366 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
CTNS-201ENST00000046640 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 CDRT15L2A8MXV6 281 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 TNFSF12O43508 249 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 PMP22Q01453 160 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 PRDX4Q13162 271 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 ARL6IP1Q15041 203 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 OR8B8Q15620 311 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 NEK7Q8TDX7 302 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 ZNF552Q9H707 407 aaPredicted RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 COL27A1Q8IZC6 1860 aaPredicted RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 KRTAP27-1Q3LI81 207 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 ZFP62Q8NB50 900 aaPredicted RBP11.28□□□□□ -0.6
CTNS-201ENST00000046640 C1QTNF5Q9BXJ0 243 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 GPR87Q9BY21 358 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 MIOXQ9UGB7 285 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 ZDHHC8Q9ULC8 765 aa11.28□□□□□ -0.6
CTNS-201ENST00000046640 BORCS7-ASMTA0A0B4J1R7 106 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 ZNF727A8MUV8 499 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 E5RGE8 158 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 ZNF883P0CG24 379 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.6
CTNS-201ENST00000046640 RNFT1Q5M7Z0 435 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 NAA60Q9H7X0 242 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 NSG2Q9Y328 171 aa11.27□□□□□ -0.6
CTNS-201ENST00000046640 C5orf52A6NGY3 159 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms