RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TMEM225BP0DP42 221 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 CD24P25063 80 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 RAB40BQ12829 278 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 FOXB2Q5VYV0 432 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 ZFP1Q6P2D0 407 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 OR9G1Q8NH87 305 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 SGCDQ92629 289 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 Q96MT0 163 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 ISG20L2Q9H9L3 353 aaKnown RBP12.64□□□□□ -0.39
ERCC1-201ENST00000013807 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 NPIPB11E5RHQ5 1161 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 DUS4LO95620 317 aaKnown RBP12.63□□□□□ -0.39
ERCC1-201ENST00000013807 LPLP06858 475 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 CCDC159P0C7I6 412 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 MNDAP41218 407 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 KCNJ3P48549 501 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 IL13RA2Q14627 380 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 ZIK1Q3SY52 487 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-201ENST00000013807 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 UTF1Q5T230 341 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 OR10A7Q8NGE5 316 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 CAPSLQ8WWF8 208 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 CPNE2Q96FN4 548 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-201ENST00000013807 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
ERCC1-201ENST00000013807 ERVK13-1Q9NX77 482 aa12.63□□□□□ -0.39
ERCC1-201ENST00000013807 TRAV24A0A0B4J272 114 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 E9PI62 339 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 J3QR06 171 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 HCKP08631 526 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 FAM106CPP0CH98 169 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 CD33P20138 364 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 SCN1BQ07699 218 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 ATXN7L3Q14CW9 347 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-201ENST00000013807 CBR4Q8N4T8 237 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 MYDGFQ969H8 173 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 JAM3Q9BX67 310 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 GMPPBQ9Y5P6 360 aa12.62□□□□□ -0.39
ERCC1-201ENST00000013807 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 H0YJX3 145 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 IGLL1P15814 213 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 C21orf33P30042 268 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-201ENST00000013807 SLC35A2P78381 396 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 NHLRC3Q5JS37 347 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 RSBN1Q5VWQ0 802 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-201ENST00000013807 C10orf67Q8IYJ2 551 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 OSR2Q8N2R0 312 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
ERCC1-201ENST00000013807 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
ERCC1-201ENST00000013807 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-201ENST00000013807 A0A1W2PPI3 338 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 IL1AP01583 271 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 LIMS3P0CW19 117 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 LIMS4P0CW20 117 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 PF4V1P10720 104 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 RAB3AP20336 220 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 KLHL22Q53GT1 634 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 LPCAT4Q643R3 524 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 OR13A1Q8NGR1 328 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 C9orf16Q9BUW7 83 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 IDI2-AS1Q9NZ38 188 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 KIF25Q9UIL4 384 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 PSG11Q9UQ72 335 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 MOB4Q9Y3A3 225 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
ERCC1-201ENST00000013807 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
ERCC1-201ENST00000013807 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 A0A1W2PRX2 142 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 GABRPO00591 440 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 FGF16O43320 207 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 SLC6A1P30531 599 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 OR3A4PP47883 348 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 RAB7AP51149 207 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
ERCC1-201ENST00000013807 EGFEM1PQ0D2K5 195 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 EBI3Q14213 229 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 PAN3Q58A45 887 aaKnown RBP12.59□□□□□ -0.39
ERCC1-201ENST00000013807 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 CCDC121Q6ZUS5 278 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 OR8H3Q8N146 312 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 RGP1Q92546 391 aaPredicted RBP12.59□□□□□ -0.39
ERCC1-201ENST00000013807 RPEQ96AT9 228 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
ERCC1-201ENST00000013807 AMBNQ9NP70 447 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms