RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Igkv19-93A0A0G2JFZ3 115 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Siglec15A7E1W8 342 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Enpp7D3Z6V6 446 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Cldn20G5E8X0 219 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Mab21l1O70299 359 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 GdnfP48540 211 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Kcnn3P58391 732 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 ElaneQ3UP87 265 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Zfp82Q6P9Y7 530 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Nmnat2Q8BNJ3 307 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Fam214bQ8BR27 538 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Depp1Q8K2F3 205 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Thap7Q8VCZ3 309 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Nudcd2Q9CQ48 157 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Atg12Q9CQY1 141 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Xrcc2Q9CX47 278 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 SpegQ62407 3262 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Ighv1-13A0A075B5I0 98 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Igkv6-15A0A140T8M5 115 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Igkv13-84A0A140T8N3 115 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gm11127A7VMS2 374 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 B3gat2P59270 324 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Smn1P97801 288 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 ToxQ66JW3 526 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Oxgr1Q6IYF8 337 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Thap4Q6P3Z3 569 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Rpl35Q6ZWV7 123 aaKnown RBP22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Olfr32Q7TQZ0 308 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Prss34Q80UR4 318 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Egln1Q91YE3 400 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tmem246Q91YV9 403 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Bcl7bQ921K9 202 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Atp6v1g1Q9CR51 118 aa22.3■■□□□ 1.16
Tpm1-216ENSMUST00000113707 MgmtP26187 211 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tcl1b1P56840 116 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Vstm2lQ6PDS0 220 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Prss43Q76HL1 382 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Ap1s3Q7TN05 154 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tmem30bQ8BHG3 353 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Exosc4Q921I9 245 aaKnown RBP22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tmem50bQ9D1X9 158 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Elp4Q9ER73 422 aa22.29■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gm28961A0A087WPA5 222 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Sirpb1bA0A0A6YXN8 397 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Obp2bA2BHR0 176 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tarm1B6A8R8 288 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Ankrd29D3YVV3 309 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 H2-T10F6T1I5 379 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Sirpb1cK7N6K7 397 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 H1f0P10922 194 aaKnown RBP22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Irf2P23906 349 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gng2P63213 71 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gpr89aQ8BS95 455 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Cdc42ep2Q8JZX9 214 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Tmem17Q8K0U3 198 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Vmn1r74Q8R290 304 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Vmn1r179Q8R2B4 323 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Dram2Q9CR48 267 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Mpc2Q9D023 127 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Igkv5-37A0A140T8N4 115 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Aldh3b3J3QMK6 479 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Zfp955bL7N232 545 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Cd82P40237 266 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 GalnsQ571E4 520 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 N6amt1Q6SKR2 214 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Znf250Q7TNU6 535 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Zfp3Q8BLB0 497 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gpr137bQ8BNQ3 385 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Scgb2b27Q8R1E9 112 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 CdiptQ8VDP6 213 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Olfr1459Q8VFV9 307 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Zfp959Q91VM8 539 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Cmtm3Q99LJ5 184 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 2210010C04RikQ9CPN9 247 aaKnown RBP22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 9230110F15RikQ9D262 117 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Vmn1r41Q9EQ44 310 aa22.28■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Arfgef3Q3UGY8 2170 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Olfr1221L7MU53 311 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Emg1O35130 244 aaKnown RBP22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Gm9125P0DMR6 365 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 GusbP12265 648 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Hnf1aP22361 628 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Egr3P43300 387 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 EnsaP60840 121 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Plcxd3Q8BLJ3 321 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Slc38a2Q8CFE6 504 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Klf11Q8K1S5 502 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 CmblQ8R1G2 245 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Yif1aQ91XB7 293 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Lap3Q9CPY7 519 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Mzt2Q9CQ25 159 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Mmp24Q9R0S2 618 aa22.27■■□□□ 1.16
Tpm1-216ENSMUST00000113707 Vmn2r66K7N6R9 851 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 EhfO70273 300 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 Tdpoz1P0DMR5 365 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 Defb4P82019 63 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 RhodP97348 210 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 Anxa11P97384 503 aaKnown RBP22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 Treml4Q3LRV9 263 aa22.26■■□□□ 1.15
Tpm1-216ENSMUST00000113707 Pld6Q5SWZ9 221 aa22.26■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms